| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266244
Identifier: 32266244
GI number: 32266244
Start: 729969
End: 731624
Strand: Direct
Name: 32266244
Synonym: HH0745
Alternate gene names: NA
Gene position: 729969-731624 (Clockwise)
Preceding gene: 32266243
Following gene: 32266245
Centisome position: 40.57
GC content: 38.16
Gene sequence:
>1656_bases ATGTGGGGGATTAGAAAAAATTTTCTTGCTTTAGGAATGTTAAGCAGTTGCTTCTATGGCTCACTTGAAGCTTTAGAGTT TGGGTCAATGGGTAACACTTCTGCGGCAATGGGTGGAGCTGGAGTAGCCTTGAAACATTCTGCGTGGGGATTGTATTATA ATCCTGCGCTTCTTAGTTCTGACCCGCGAGTAAAAATGGGATATTCTTTGGGTATTGGCTTAAAAGAACATAATCTTGCT AAAATTGCTAAAATTGATATTAAAAATATGGCAAATACTGCTGAGCGACTTGTAAGCACTTTTGCTTCTGGTAGTGGAAC AAATGTGGGTGAGATTACAAATGTTGTCAAAGATGCACTTAGCTCTGTGCTTACTTCAAGCGGACAAACTCCAACTGGTA ATGTTGAACAAGATTTACAAACCTATCTACAAAATCATCAAGGCGGCAATTACAGCGATTTGATAACCCAAGTATTACAA CAAGTCCAACAAAGCTCCTCTCTTAACCCTGAACAAAAAGACCTACTTAGCCATATTGCAGGAAGTATTGATTATGGTAA ACTTGACTTTAGCCAAGCAGGAGCGGGTGGTGTAGCAGGACTTTTACAAGATATTACTATTTCTAAAGGCGGTGATAAAG GGCTTGATAAAGCTGTGAATGATATTAGTGCCGTGCAAGATATACTTAAAGATAATAACCTTAATGTTACAAGCCAAGAT GGTGTAATCTTGCAACTCTCTAGCAAAACAATGAATGAAAAGCTAGGTTCTCTTGGCGTAGCAATTTTTGCCTCTGTGTA TTCAAGTATGTCAGTCAAAGCTGATGCTTCTCGTATGCGTCTTATCATTGATGGTGGCAATGGTAGTTATTATGAGCTAA CAGATAATGGTGATAGCTTTAGTTATAAAGTTTCGAATCAAACCGACTATAACAACTACTCACTCATTGCTGCCTTAGAA GATAGTAGCGATGCACACAAGCTTATTGCTACAAGCTTTGTGCTTACTGAACTGCCTATAGGCTATGCGAGGACTTTTTA TCTCAAAAATGGCAACCTCAACATTGGTGTAACAGGCAAATTTATGAGTGCCATTAGCACCCAAAGTCAAATGAATATCA AAACAAATATAGACTTTAAAAAAGAGCTTACTAATTTTGCCTCGCTTGATAATGCTATTTCTTCAAATAATTTTGGTATT GATGTTGGCGCACTTTATGAGGTTGATTTCCCCGAATTTCGCTATCTTACCTTTGGACTTGTAGTAAAAAATATCAATTC CCCATCCTTTCAATCTACACTCTCGGATATTACTATCAAGCCACAATACAGGGCAGGGATTGGTTATAATTCAAAAAGAT TTAATCTCGCTTTTGATGCAGATTTAACTCCAAATGATTTGATTGCATTTAGCAATATTAGACAGCAAAGTCAAATGATT GGAGGCGGTATTGCTTTTGATTTAAAAGCAATTGATGTGCGCGTGGGTGCAATGAAAGATTTACGCCAAGATACGGGACT TATACTCACAGGGGGACTTAATGTGCTTGGATTCCTTGATATTGCCTTGCAAACGAGCACCAAATTCACTCGTGTAGAGA ACATACCTATTCCTCAATATATCAATCTACGCGTAGGCGGAAGCTTAAGCTTTTAG
Upstream 100 bases:
>100_bases GAGTGAATCTTCACTCCTTCATAGAATCTTCAATTCACATCAAAATAGCTTCATCAACTCTTCTCCCATTCCTGTTTTGG TAGCGAAATAAGGAGTTGTA
Downstream 100 bases:
>100_bases TTTAATAGGAGAGAAGACATAGCTGACCCTTTAGAAATTCTACAAGAGGGCTTAAAAATACTTTTGGAGGCAATGAATGA AAAAGTTAATTTTGCTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MWGIRKNFLALGMLSSCFYGSLEALEFGSMGNTSAAMGGAGVALKHSAWGLYYNPALLSSDPRVKMGYSLGIGLKEHNLA KIAKIDIKNMANTAERLVSTFASGSGTNVGEITNVVKDALSSVLTSSGQTPTGNVEQDLQTYLQNHQGGNYSDLITQVLQ QVQQSSSLNPEQKDLLSHIAGSIDYGKLDFSQAGAGGVAGLLQDITISKGGDKGLDKAVNDISAVQDILKDNNLNVTSQD GVILQLSSKTMNEKLGSLGVAIFASVYSSMSVKADASRMRLIIDGGNGSYYELTDNGDSFSYKVSNQTDYNNYSLIAALE DSSDAHKLIATSFVLTELPIGYARTFYLKNGNLNIGVTGKFMSAISTQSQMNIKTNIDFKKELTNFASLDNAISSNNFGI DVGALYEVDFPEFRYLTFGLVVKNINSPSFQSTLSDITIKPQYRAGIGYNSKRFNLAFDADLTPNDLIAFSNIRQQSQMI GGGIAFDLKAIDVRVGAMKDLRQDTGLILTGGLNVLGFLDIALQTSTKFTRVENIPIPQYINLRVGGSLSF
Sequences:
>Translated_551_residues MWGIRKNFLALGMLSSCFYGSLEALEFGSMGNTSAAMGGAGVALKHSAWGLYYNPALLSSDPRVKMGYSLGIGLKEHNLA KIAKIDIKNMANTAERLVSTFASGSGTNVGEITNVVKDALSSVLTSSGQTPTGNVEQDLQTYLQNHQGGNYSDLITQVLQ QVQQSSSLNPEQKDLLSHIAGSIDYGKLDFSQAGAGGVAGLLQDITISKGGDKGLDKAVNDISAVQDILKDNNLNVTSQD GVILQLSSKTMNEKLGSLGVAIFASVYSSMSVKADASRMRLIIDGGNGSYYELTDNGDSFSYKVSNQTDYNNYSLIAALE DSSDAHKLIATSFVLTELPIGYARTFYLKNGNLNIGVTGKFMSAISTQSQMNIKTNIDFKKELTNFASLDNAISSNNFGI DVGALYEVDFPEFRYLTFGLVVKNINSPSFQSTLSDITIKPQYRAGIGYNSKRFNLAFDADLTPNDLIAFSNIRQQSQMI GGGIAFDLKAIDVRVGAMKDLRQDTGLILTGGLNVLGFLDIALQTSTKFTRVENIPIPQYINLRVGGSLSF >Mature_551_residues MWGIRKNFLALGMLSSCFYGSLEALEFGSMGNTSAAMGGAGVALKHSAWGLYYNPALLSSDPRVKMGYSLGIGLKEHNLA KIAKIDIKNMANTAERLVSTFASGSGTNVGEITNVVKDALSSVLTSSGQTPTGNVEQDLQTYLQNHQGGNYSDLITQVLQ QVQQSSSLNPEQKDLLSHIAGSIDYGKLDFSQAGAGGVAGLLQDITISKGGDKGLDKAVNDISAVQDILKDNNLNVTSQD GVILQLSSKTMNEKLGSLGVAIFASVYSSMSVKADASRMRLIIDGGNGSYYELTDNGDSFSYKVSNQTDYNNYSLIAALE DSSDAHKLIATSFVLTELPIGYARTFYLKNGNLNIGVTGKFMSAISTQSQMNIKTNIDFKKELTNFASLDNAISSNNFGI DVGALYEVDFPEFRYLTFGLVVKNINSPSFQSTLSDITIKPQYRAGIGYNSKRFNLAFDADLTPNDLIAFSNIRQQSQMI GGGIAFDLKAIDVRVGAMKDLRQDTGLILTGGLNVLGFLDIALQTSTKFTRVENIPIPQYINLRVGGSLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59240; Mature: 59240
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGIRKNFLALGMLSSCFYGSLEALEFGSMGNTSAAMGGAGVALKHSAWGLYYNPALLSS CCCCHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCEEEEECCCCEEECCEEECC DPRVKMGYSLGIGLKEHNLAKIAKIDIKNMANTAERLVSTFASGSGTNVGEITNVVKDAL CCCEEEEEEEECCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SSVLTSSGQTPTGNVEQDLQTYLQNHQGGNYSDLITQVLQQVQQSSSLNPEQKDLLSHIA HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GSIDYGKLDFSQAGAGGVAGLLQDITISKGGDKGLDKAVNDISAVQDILKDNNLNVTSQD CCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCC GVILQLSSKTMNEKLGSLGVAIFASVYSSMSVKADASRMRLIIDGGNGSYYELTDNGDSF CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCEEEEECCCCCE SYKVSNQTDYNNYSLIAALEDSSDAHKLIATSFVLTELPIGYARTFYLKNGNLNIGVTGK EEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECHH FMSAISTQSQMNIKTNIDFKKELTNFASLDNAISSNNFGIDVGALYEVDFPEFRYLTFGL HHHHHCCHHHCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHEEEEE VVKNINSPSFQSTLSDITIKPQYRAGIGYNSKRFNLAFDADLTPNDLIAFSNIRQQSQMI HEECCCCCHHHHHHHHCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHH GGGIAFDLKAIDVRVGAMKDLRQDTGLILTGGLNVLGFLDIALQTSTKFTRVENIPIPQY CCCEEEEEEEEEEEHHHHHHHHCCCCEEEECCCCEEEHHHHHEECCCCEEEECCCCCCCE INLRVGGSLSF EEEEECCCCCC >Mature Secondary Structure MWGIRKNFLALGMLSSCFYGSLEALEFGSMGNTSAAMGGAGVALKHSAWGLYYNPALLSS CCCCHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCEEEEECCCCEEECCEEECC DPRVKMGYSLGIGLKEHNLAKIAKIDIKNMANTAERLVSTFASGSGTNVGEITNVVKDAL CCCEEEEEEEECCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SSVLTSSGQTPTGNVEQDLQTYLQNHQGGNYSDLITQVLQQVQQSSSLNPEQKDLLSHIA HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GSIDYGKLDFSQAGAGGVAGLLQDITISKGGDKGLDKAVNDISAVQDILKDNNLNVTSQD CCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCC GVILQLSSKTMNEKLGSLGVAIFASVYSSMSVKADASRMRLIIDGGNGSYYELTDNGDSF CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCEEEEECCCCCE SYKVSNQTDYNNYSLIAALEDSSDAHKLIATSFVLTELPIGYARTFYLKNGNLNIGVTGK EEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECHH FMSAISTQSQMNIKTNIDFKKELTNFASLDNAISSNNFGIDVGALYEVDFPEFRYLTFGL HHHHHCCHHHCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHEEEEE VVKNINSPSFQSTLSDITIKPQYRAGIGYNSKRFNLAFDADLTPNDLIAFSNIRQQSQMI HEECCCCCHHHHHHHHCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHH GGGIAFDLKAIDVRVGAMKDLRQDTGLILTGGLNVLGFLDIALQTSTKFTRVENIPIPQY CCCEEEEEEEEEEEHHHHHHHHCCCCEEEECCCCEEEHHHHHEECCCCEEEECCCCCCCE INLRVGGSLSF EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA