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The map label for this gene is frdC

Identifier: 32266184

GI number: 32266184

Start: 665272

End: 666042

Strand: Direct

Name: frdC

Synonym: HH0685

Alternate gene names: 32266184

Gene position: 665272-666042 (Clockwise)

Preceding gene: 32266183

Following gene: 32266185

Centisome position: 36.98

GC content: 38.39

Gene sequence:

>771_bases
ATGCGAGAGGATAAAATAATTGAAAGCTACACAGGGGTAACACCTCAAAGAAAAAAGAGTAAAATCCCTGCCAAACTTGA
TTTTTGGCAAAGTGCAACAGGCCTATTCTTAGGGTTGTTTATGTTGGCACATTTACTTTTTGTATCAAGTATCTTAATCA
GCAAAGAAGCGATGTATAAAGTTACAAAATTCTTTGAGGGCAGTATGATTTTTGGTGAGGCAGGCGAGCCACGTCTTGTT
TCTGTTATTGTGGCTATTGTCATTATTGCTCTTGTAGTGCATGCGTTTTTGGCGTTGAGAAAATTCCCGATTAACTACAA
ACAATTTCTCGCCTTACGTGTTCATAAAGATTTAATGAAGCACGGGGATACAAGTTATTGGGCAATTCAAGCAGCGACAG
GCTTTGCTATTTTCTTTTTGGCAATGCCACACGTATTCATAATGCTTACACAACCTGAAAATATCGGTCCAAGTGCAAGT
TCATATAGATTCTATCACCAAGATTTCTATTTGCTTTATGCACTTTTACTTTTTGCTGTTGAATTTCACGGCTCTATTGG
ACTTTATCGGCTTTGTATTAAATGGGGCTGGTTTGAAGGGCTTGGAATCAAAGCATTACGTGCTATTAAGCTAGCTCTCA
CAGCATTCTGCCTTATACTTGGTATTGCTTCATATGTGGCGTATATGCAAATTGGACACGGACTAGATAGTAGCTACAGT
ATTCAGGAATATAGAATAATCGATGAGCACACACAAGGGAAAGGAGAGTAA

Upstream 100 bases:

>100_bases
GTAGCTTAGCCTTTTTAAAATGCTACTAAGTAGTTTTGGGATAAAAGCTCCTAGAGTGCTTGTGTAAGCTATAGAGGTCA
AACTACAAACAGGAGGTTTC

Downstream 100 bases:

>100_bases
ATGAAAGTAGTATATTCAGATGCACTGATTATTGGCGGTGGTTTAGCAGGACTTCGTGCTTCTATTGCAGCAAAACAGGC
AGGGCTTAACACCATTGTGC

Product: fumarate reductase cytochrome b-556 subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MREDKIIESYTGVTPQRKKSKIPAKLDFWQSATGLFLGLFMLAHLLFVSSILISKEAMYKVTKFFEGSMIFGEAGEPRLV
SVIVAIVIIALVVHAFLALRKFPINYKQFLALRVHKDLMKHGDTSYWAIQAATGFAIFFLAMPHVFIMLTQPENIGPSAS
SYRFYHQDFYLLYALLLFAVEFHGSIGLYRLCIKWGWFEGLGIKALRAIKLALTAFCLILGIASYVAYMQIGHGLDSSYS
IQEYRIIDEHTQGKGE

Sequences:

>Translated_256_residues
MREDKIIESYTGVTPQRKKSKIPAKLDFWQSATGLFLGLFMLAHLLFVSSILISKEAMYKVTKFFEGSMIFGEAGEPRLV
SVIVAIVIIALVVHAFLALRKFPINYKQFLALRVHKDLMKHGDTSYWAIQAATGFAIFFLAMPHVFIMLTQPENIGPSAS
SYRFYHQDFYLLYALLLFAVEFHGSIGLYRLCIKWGWFEGLGIKALRAIKLALTAFCLILGIASYVAYMQIGHGLDSSYS
IQEYRIIDEHTQGKGE
>Mature_256_residues
MREDKIIESYTGVTPQRKKSKIPAKLDFWQSATGLFLGLFMLAHLLFVSSILISKEAMYKVTKFFEGSMIFGEAGEPRLV
SVIVAIVIIALVVHAFLALRKFPINYKQFLALRVHKDLMKHGDTSYWAIQAATGFAIFFLAMPHVFIMLTQPENIGPSAS
SYRFYHQDFYLLYALLLFAVEFHGSIGLYRLCIKWGWFEGLGIKALRAIKLALTAFCLILGIASYVAYMQIGHGLDSSYS
IQEYRIIDEHTQGKGE

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 28997; Mature: 28997

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREDKIIESYTGVTPQRKKSKIPAKLDFWQSATGLFLGLFMLAHLLFVSSILISKEAMYK
CCCCHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTKFFEGSMIFGEAGEPRLVSVIVAIVIIALVVHAFLALRKFPINYKQFLALRVHKDLMK
HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HGDTSYWAIQAATGFAIFFLAMPHVFIMLTQPENIGPSASSYRFYHQDFYLLYALLLFAV
CCCCCEEEEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EFHGSIGLYRLCIKWGWFEGLGIKALRAIKLALTAFCLILGIASYVAYMQIGHGLDSSYS
HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IQEYRIIDEHTQGKGE
HHHEEEEHHCCCCCCC
>Mature Secondary Structure
MREDKIIESYTGVTPQRKKSKIPAKLDFWQSATGLFLGLFMLAHLLFVSSILISKEAMYK
CCCCHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTKFFEGSMIFGEAGEPRLVSVIVAIVIIALVVHAFLALRKFPINYKQFLALRVHKDLMK
HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HGDTSYWAIQAATGFAIFFLAMPHVFIMLTQPENIGPSASSYRFYHQDFYLLYALLLFAV
CCCCCEEEEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EFHGSIGLYRLCIKWGWFEGLGIKALRAIKLALTAFCLILGIASYVAYMQIGHGLDSSYS
HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IQEYRIIDEHTQGKGE
HHHEEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]