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The map label for this gene is yfbG [C]

Identifier: 32266146

GI number: 32266146

Start: 624954

End: 625892

Strand: Direct

Name: yfbG [C]

Synonym: HH0647

Alternate gene names: 32266146

Gene position: 624954-625892 (Clockwise)

Preceding gene: 32266141

Following gene: 32266147

Centisome position: 34.74

GC content: 37.7

Gene sequence:

>939_bases
ATGCTAAATAAAAAAATATTAGTTACAGGCGGAGCAGGATTTTTGGGCTCACATTTGTGTGAAAAACTTTTAAATCGTGG
TGATGAGGTGCTTTGTGTGGATAATCTTTTCACAGGCACAAAACAAAATATTATACATTTACTCTCAAATCCCCGTTTTG
AATTTATGCGCCACGATGTAACTTTTCCTCTCTATGTAGAAGTTGATGAAATTTATAATCTCGCTTGCCCTGCTTCTCCA
GTGCATTATCAATTTGACCCAGTGCAAACAACTAAAACTTCCGTTATGGGAGCAATCAATATGCTAGGACTTGCAAAGAG
AGTGAAAGCGAAGATTCTGCAAGCAAGCACGAGTGAAGTTTATGGCGATCCTGAAATCCACCCACAAGTAGAATCCTACA
AAGGCTCAGTGAATCCTATTGGTATAAGGGCGTGTTATGATGAGGGAAAGCGATGTGCAGAAACACTTTTTTTTGATTAT
CAAAGGCAGCATAATTTAAATATTAAAGTAATGAGAATTTTTAATACCTATGGACCTAGAATGCACCCAAACGATGGGCG
TGTAGTGAGTAATTTTATCATTCAAGCACTCAAAGGCGAAGATGTTACGATTTATGGCGAAGGCAAGCAAACTCGTAGTT
TTTGCTATGTAGATGATTTGATTGAGGGTATGATAAGACTTATGGATAGTAGAGATGGATTCTATGGACCTGTAAATATA
GGGAATCCACGTGAATTTAGTATGATTGAACTTGCAAATGCAGTGCTAGAGCTCACTCACTCTAAATCCAAACTTGTTTT
TTCACCCTTACCTCAAGATGACCCAAAACAACGGCAACCCGATATTAGCCTTGCTCAAAATGAGCTAGGGTGGAATCCAA
ATGTTGAGCTTAAAGAAGGGCTAATAAAAACAATTGCGTATTTTAAGGAAATTATATGA

Upstream 100 bases:

>100_bases
AATTACAGCTAATTGAATAAGTGATTTAAATGGCATAGAAAGAATCTAATGGCATTTTGGATATAATATCCCCAATAAAA
ATAAATCATAAAGGAACCTA

Downstream 100 bases:

>100_bases
AAAATAATTATTTTCTCTATAATCTTAAGGGAATCTCTCGTATGCTAACACCTGCAGTATTTTTGCCCAAAAATCGTGAG
AAAATTTTAAAAGATGTGCT

Product: nucleotide sugar dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MLNKKILVTGGAGFLGSHLCEKLLNRGDEVLCVDNLFTGTKQNIIHLLSNPRFEFMRHDVTFPLYVEVDEIYNLACPASP
VHYQFDPVQTTKTSVMGAINMLGLAKRVKAKILQASTSEVYGDPEIHPQVESYKGSVNPIGIRACYDEGKRCAETLFFDY
QRQHNLNIKVMRIFNTYGPRMHPNDGRVVSNFIIQALKGEDVTIYGEGKQTRSFCYVDDLIEGMIRLMDSRDGFYGPVNI
GNPREFSMIELANAVLELTHSKSKLVFSPLPQDDPKQRQPDISLAQNELGWNPNVELKEGLIKTIAYFKEII

Sequences:

>Translated_312_residues
MLNKKILVTGGAGFLGSHLCEKLLNRGDEVLCVDNLFTGTKQNIIHLLSNPRFEFMRHDVTFPLYVEVDEIYNLACPASP
VHYQFDPVQTTKTSVMGAINMLGLAKRVKAKILQASTSEVYGDPEIHPQVESYKGSVNPIGIRACYDEGKRCAETLFFDY
QRQHNLNIKVMRIFNTYGPRMHPNDGRVVSNFIIQALKGEDVTIYGEGKQTRSFCYVDDLIEGMIRLMDSRDGFYGPVNI
GNPREFSMIELANAVLELTHSKSKLVFSPLPQDDPKQRQPDISLAQNELGWNPNVELKEGLIKTIAYFKEII
>Mature_312_residues
MLNKKILVTGGAGFLGSHLCEKLLNRGDEVLCVDNLFTGTKQNIIHLLSNPRFEFMRHDVTFPLYVEVDEIYNLACPASP
VHYQFDPVQTTKTSVMGAINMLGLAKRVKAKILQASTSEVYGDPEIHPQVESYKGSVNPIGIRACYDEGKRCAETLFFDY
QRQHNLNIKVMRIFNTYGPRMHPNDGRVVSNFIIQALKGEDVTIYGEGKQTRSFCYVDDLIEGMIRLMDSRDGFYGPVNI
GNPREFSMIELANAVLELTHSKSKLVFSPLPQDDPKQRQPDISLAQNELGWNPNVELKEGLIKTIAYFKEII

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=307, Percent_Identity=57.328990228013, Blast_Score=376, Evalue=1e-104,
Organism=Homo sapiens, GI7657641, Length=330, Percent_Identity=28.7878787878788, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788589, Length=339, Percent_Identity=25.3687315634218, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI48994969, Length=339, Percent_Identity=24.4837758112094, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=24.2603550295858, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1786974, Length=327, Percent_Identity=25.6880733944954, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788365, Length=329, Percent_Identity=22.7963525835866, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17539532, Length=310, Percent_Identity=58.0645161290323, Blast_Score=380, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17568069, Length=334, Percent_Identity=28.1437125748503, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115532424, Length=333, Percent_Identity=26.4264264264264, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71982035, Length=334, Percent_Identity=26.3473053892216, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982038, Length=336, Percent_Identity=26.4880952380952, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356223, Length=306, Percent_Identity=57.843137254902, Blast_Score=377, Evalue=1e-105,
Organism=Drosophila melanogaster, GI19923002, Length=327, Percent_Identity=23.8532110091743, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35250; Mature: 35250

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKKILVTGGAGFLGSHLCEKLLNRGDEVLCVDNLFTGTKQNIIHLLSNPRFEFMRHDV
CCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHCC
TFPLYVEVDEIYNLACPASPVHYQFDPVQTTKTSVMGAINMLGLAKRVKAKILQASTSEV
CCEEEEEHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
YGDPEIHPQVESYKGSVNPIGIRACYDEGKRCAETLFFDYQRQHNLNIKVMRIFNTYGPR
CCCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
MHPNDGRVVSNFIIQALKGEDVTIYGEGKQTRSFCYVDDLIEGMIRLMDSRDGFYGPVNI
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCC
GNPREFSMIELANAVLELTHSKSKLVFSPLPQDDPKQRQPDISLAQNELGWNPNVELKEG
CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHCCCCCHHHHHHCCCCCCCHHHHH
LIKTIAYFKEII
HHHHHHHHHHHC
>Mature Secondary Structure
MLNKKILVTGGAGFLGSHLCEKLLNRGDEVLCVDNLFTGTKQNIIHLLSNPRFEFMRHDV
CCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHCC
TFPLYVEVDEIYNLACPASPVHYQFDPVQTTKTSVMGAINMLGLAKRVKAKILQASTSEV
CCEEEEEHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
YGDPEIHPQVESYKGSVNPIGIRACYDEGKRCAETLFFDYQRQHNLNIKVMRIFNTYGPR
CCCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
MHPNDGRVVSNFIIQALKGEDVTIYGEGKQTRSFCYVDDLIEGMIRLMDSRDGFYGPVNI
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCC
GNPREFSMIELANAVLELTHSKSKLVFSPLPQDDPKQRQPDISLAQNELGWNPNVELKEG
CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHCCCCCHHHHHHCCCCCCCHHHHH
LIKTIAYFKEII
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]