Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32265975

Identifier: 32265975

GI number: 32265975

Start: 461646

End: 462074

Strand: Direct

Name: 32265975

Synonym: HH0476

Alternate gene names: NA

Gene position: 461646-462074 (Clockwise)

Preceding gene: 32265974

Following gene: 32265976

Centisome position: 25.66

GC content: 29.84

Gene sequence:

>429_bases
ATGAAAAACAGAATAAAACTCAAATTGGCGTTGGGAGTTAGTTTACTTGCATTATTTTTTAGTGTGAGCAAAGCAGATGC
AAGAGTTGCGTGTCAAAATAAAGATAATGAAGTTTTTTGGGAAATGGAATTTTATGGTTTTAGCTTTATAGAACTTGACA
AAGATGGTAAAGTTTATTGCAATAGTTGGGATTGCCTTAATGAACATAGTATTAATTGTGGTAAAAATAGTCGTAATGGT
AGTTGCGAACAAAATTTACCTTTTTTAAGTGTGGCTATAGAAAATAAATTTTATGAGTTTCTTGAGCAAAGAAAAAAAGA
GTTTATAGATAGTGGCGAATGTAGAGTATTTAAATTTAATAATGACGAGCATAGTGAGGAGGATGACGAAAATGACATTG
AGAAAATTAAAGATAGAAGAGGTTTTTAA

Upstream 100 bases:

>100_bases
AAATGAGAAAAATTTTCAAAGAAGCTTTATATAAACATAGAGAGGAATTATTATTAAGTGGAGAATGTGTTAAGGTAGAT
TTTAATAAGAAGAGTGCAGA

Downstream 100 bases:

>100_bases
TAATGAGTGATCTTGAAAATATTAAGTGGATGTCTCTATATGGATATAAATATAAGGAGAGAAGAATGATTGCAAAATAA
AACATCTTAAAGGTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKNRIKLKLALGVSLLALFFSVSKADARVACQNKDNEVFWEMEFYGFSFIELDKDGKVYCNSWDCLNEHSINCGKNSRNG
SCEQNLPFLSVAIENKFYEFLEQRKKEFIDSGECRVFKFNNDEHSEEDDENDIEKIKDRRGF

Sequences:

>Translated_142_residues
MKNRIKLKLALGVSLLALFFSVSKADARVACQNKDNEVFWEMEFYGFSFIELDKDGKVYCNSWDCLNEHSINCGKNSRNG
SCEQNLPFLSVAIENKFYEFLEQRKKEFIDSGECRVFKFNNDEHSEEDDENDIEKIKDRRGF
>Mature_142_residues
MKNRIKLKLALGVSLLALFFSVSKADARVACQNKDNEVFWEMEFYGFSFIELDKDGKVYCNSWDCLNEHSINCGKNSRNG
SCEQNLPFLSVAIENKFYEFLEQRKKEFIDSGECRVFKFNNDEHSEEDDENDIEKIKDRRGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16648; Mature: 16648

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRIKLKLALGVSLLALFFSVSKADARVACQNKDNEVFWEMEFYGFSFIELDKDGKVYC
CCCEEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEEECCCCCEEE
NSWDCLNEHSINCGKNSRNGSCEQNLPFLSVAIENKFYEFLEQRKKEFIDSGECRVFKFN
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEC
NDEHSEEDDENDIEKIKDRRGF
CCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKNRIKLKLALGVSLLALFFSVSKADARVACQNKDNEVFWEMEFYGFSFIELDKDGKVYC
CCCEEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEEECCCCCEEE
NSWDCLNEHSINCGKNSRNGSCEQNLPFLSVAIENKFYEFLEQRKKEFIDSGECRVFKFN
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEC
NDEHSEEDDENDIEKIKDRRGF
CCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA