| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is yaeI [C]
Identifier: 32265945
GI number: 32265945
Start: 425458
End: 426615
Strand: Direct
Name: yaeI [C]
Synonym: HH0446
Alternate gene names: 32265945
Gene position: 425458-426615 (Clockwise)
Preceding gene: 32265944
Following gene: 32265952
Centisome position: 23.65
GC content: 34.8
Gene sequence:
>1158_bases ATGCAGGATATACCACAATTTGCACAAATGCAAAATACTATATTTCCTTTTATGGGCTCATTTGTATTTATTGTGCTTCA TATCTATATTTACAAAGCATTGCTCAAATCGCTTTCAACTAAGCTTTTTGTACGCTTTGTATGGAAAATTTTTACCTGCT TTAATGCTGTAGGTTGTATAGCTTATCTTTTTTTGCGTGATAGCGCTTATGTGCCACAAGGAATTTATTTTCTACTCTCG TTTTGTTTGGGCATTACTTTTTTATTTGCAATGGCTGCTTTTTTCTATCAATGTTGCTCTCTTATAATAATGACATTACA CACCAAATCTGCACGTTCTCGCTGGAGACATAGGGCAAAAGTGAGCATTTTTCTCTTTGCCCTCATTATGCTTGTCTTTG GCACTTATAATGGCACAAAAAACCCTAATATTGTGCATATAAGTATTGAATTAGAAGGATTAAGCACACCTATTAAAGCA GCAGTTTTAAGTGATGTGCATATCGGTGGGCTTATAGAGGAAAATAAAGTCAAACAAATTGTCAAAATAACAAATGAGCT TAATGCAGATATGATATTTCTTACAGGAGACATTGTAGATGCACCACTAAAAAATGTGCAAAATGCTCTTAATGAACTCA AAAATCTTAGAGCAAATGATGGCATATTTTATGTATTGGGTAATCACGAATATTTCCACGATGTAGAAAATATTCTTAAA GAGCTCAAATCATTTGGATTTTATATACTTATCAATCAAAATTACACTCTTAAAGACACGCTTAATATCGTGGGAATAGC TGATTTTATGGGCTGGCGCATAGGGCATTTAGAACCAAATATTGATGAGGCATTAAAAAATATAAATCCTCATCTCCCTA CAATTCTCCTTGCACATCAACCTAAAGTCATTAATTATCTCAAAGCACCTTATGATAAAGTTGATTTAGTAGTAAGCGGA CATACACACGGCGGACAAATTTTTCCATTCTCACTTGCTATGCTCTTGCAACAACCTTTTATTTCTGGATTACATACATT AGAGAATCTTCATCAAACAAAAGTATATGTCTCACAAGGCACAGGATTTTGGGGACCACCTATGCGCATTGGGAGCAACC ACGAAATTACGCTCCTTGAGCTTGTGCCTCCTCACTAA
Upstream 100 bases:
>100_bases AATAAACTAATAAATAATGCTAATAATATAGACTTTTAAGTCCTACCTTGATAGAATCTAGGCTTTTAATTTCAAAGTAT AACCTTTGTAAGGAGCATTT
Downstream 100 bases:
>100_bases GATTCTTATCCTCATCATTCATTTCATTGCTTTCATCGGCTATATTTTGTTGGGGGACTTTTTGCTCCTCTTTGCCCTCT TGTGCATCTTGCATCTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MQDIPQFAQMQNTIFPFMGSFVFIVLHIYIYKALLKSLSTKLFVRFVWKIFTCFNAVGCIAYLFLRDSAYVPQGIYFLLS FCLGITFLFAMAAFFYQCCSLIIMTLHTKSARSRWRHRAKVSIFLFALIMLVFGTYNGTKNPNIVHISIELEGLSTPIKA AVLSDVHIGGLIEENKVKQIVKITNELNADMIFLTGDIVDAPLKNVQNALNELKNLRANDGIFYVLGNHEYFHDVENILK ELKSFGFYILINQNYTLKDTLNIVGIADFMGWRIGHLEPNIDEALKNINPHLPTILLAHQPKVINYLKAPYDKVDLVVSG HTHGGQIFPFSLAMLLQQPFISGLHTLENLHQTKVYVSQGTGFWGPPMRIGSNHEITLLELVPPH
Sequences:
>Translated_385_residues MQDIPQFAQMQNTIFPFMGSFVFIVLHIYIYKALLKSLSTKLFVRFVWKIFTCFNAVGCIAYLFLRDSAYVPQGIYFLLS FCLGITFLFAMAAFFYQCCSLIIMTLHTKSARSRWRHRAKVSIFLFALIMLVFGTYNGTKNPNIVHISIELEGLSTPIKA AVLSDVHIGGLIEENKVKQIVKITNELNADMIFLTGDIVDAPLKNVQNALNELKNLRANDGIFYVLGNHEYFHDVENILK ELKSFGFYILINQNYTLKDTLNIVGIADFMGWRIGHLEPNIDEALKNINPHLPTILLAHQPKVINYLKAPYDKVDLVVSG HTHGGQIFPFSLAMLLQQPFISGLHTLENLHQTKVYVSQGTGFWGPPMRIGSNHEITLLELVPPH >Mature_385_residues MQDIPQFAQMQNTIFPFMGSFVFIVLHIYIYKALLKSLSTKLFVRFVWKIFTCFNAVGCIAYLFLRDSAYVPQGIYFLLS FCLGITFLFAMAAFFYQCCSLIIMTLHTKSARSRWRHRAKVSIFLFALIMLVFGTYNGTKNPNIVHISIELEGLSTPIKA AVLSDVHIGGLIEENKVKQIVKITNELNADMIFLTGDIVDAPLKNVQNALNELKNLRANDGIFYVLGNHEYFHDVENILK ELKSFGFYILINQNYTLKDTLNIVGIADFMGWRIGHLEPNIDEALKNINPHLPTILLAHQPKVINYLKAPYDKVDLVVSG HTHGGQIFPFSLAMLLQQPFISGLHTLENLHQTKVYVSQGTGFWGPPMRIGSNHEITLLELVPPH
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=277, Percent_Identity=31.7689530685921, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI210031210, Length=277, Percent_Identity=31.7689530685921, Blast_Score=133, Evalue=3e-31, Organism=Escherichia coli, GI87081695, Length=243, Percent_Identity=28.8065843621399, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI115535030, Length=279, Percent_Identity=32.258064516129, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI115535028, Length=280, Percent_Identity=32.1428571428571, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71996034, Length=278, Percent_Identity=25.5395683453237, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 43682; Mature: 43682
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDIPQFAQMQNTIFPFMGSFVFIVLHIYIYKALLKSLSTKLFVRFVWKIFTCFNAVGCI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYLFLRDSAYVPQGIYFLLSFCLGITFLFAMAAFFYQCCSLIIMTLHTKSARSRWRHRAK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VSIFLFALIMLVFGTYNGTKNPNIVHISIELEGLSTPIKAAVLSDVHIGGLIEENKVKQI HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHH VKITNELNADMIFLTGDIVDAPLKNVQNALNELKNLRANDGIFYVLGNHEYFHDVENILK HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH ELKSFGFYILINQNYTLKDTLNIVGIADFMGWRIGHLEPNIDEALKNINPHLPTILLAHQ HHHHCCEEEEEECCEEHHHHHHHEEHHHHHCCEECCCCCCHHHHHHCCCCCCCEEEEECC PKVINYLKAPYDKVDLVVSGHTHGGQIFPFSLAMLLQQPFISGLHTLENLHQTKVYVSQG CHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC TGFWGPPMRIGSNHEITLLELVPPH CCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MQDIPQFAQMQNTIFPFMGSFVFIVLHIYIYKALLKSLSTKLFVRFVWKIFTCFNAVGCI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYLFLRDSAYVPQGIYFLLSFCLGITFLFAMAAFFYQCCSLIIMTLHTKSARSRWRHRAK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VSIFLFALIMLVFGTYNGTKNPNIVHISIELEGLSTPIKAAVLSDVHIGGLIEENKVKQI HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHH VKITNELNADMIFLTGDIVDAPLKNVQNALNELKNLRANDGIFYVLGNHEYFHDVENILK HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH ELKSFGFYILINQNYTLKDTLNIVGIADFMGWRIGHLEPNIDEALKNINPHLPTILLAHQ HHHHCCEEEEEECCEEHHHHHHHEEHHHHHCCEECCCCCCHHHHHHCCCCCCCEEEEECC PKVINYLKAPYDKVDLVVSGHTHGGQIFPFSLAMLLQQPFISGLHTLENLHQTKVYVSQG CHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC TGFWGPPMRIGSNHEITLLELVPPH CCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]