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The map label for this gene is exbB [H]

Identifier: 32265852

GI number: 32265852

Start: 342217

End: 342654

Strand: Direct

Name: exbB [H]

Synonym: HH0353

Alternate gene names: 32265852

Gene position: 342217-342654 (Clockwise)

Preceding gene: 32265846

Following gene: 32265853

Centisome position: 19.02

GC content: 33.56

Gene sequence:

>438_bases
ATGGAATTTCTCAAAGATTATATTGATTATATTATTTTTGCAATTCTTGGTTTTATGAGTTTTTTAAGCGTGTGGTTTAG
CTGTGAGAGGCTCATTTTTTATATGCGTATAAATCTTAATGATTATCAAAATGAGGAAATATTAGAAGAAGTATTAAGTA
AAAATCTTACTGCTCTTTATATCATCTATTCTAATGCACCCTATGTGGGGCTTTTAGGCACAGTTATTGGGATTATGATT
ACCTTTTATGATATGGGTATGAGCGGTGGTATGGACGCCCAAAGCATTATGATTGGCTTATCTACTGCTCTTAAAGCTAC
TGCTCTTGGCTTGGTGGTAGCTATCCCTACTTTAATTGTATATAATTGCTTTGTGCGTAAAATGGACGTGCAGCTTAATC
GCTATAAACTCAGTAAAAAAGACATCAACGAGAGATAA

Upstream 100 bases:

>100_bases
ATGAATTTAAGTAAAATTAAAAGGAAGTATAATCTTATCTTAAGAATGATTTTTATAATATGCAGCAATTAAATACCTTA
ACCTTTTTTGGAGTATATTT

Downstream 100 bases:

>100_bases
ATATGAGAATCCCAAAAAAAGATGGCTTGAATATTGTCCCTTTCATTGATGTAATGCTTGTCCTTTTGGCTATTGTGCTA
AGTGTATCTACTTTTATAGC

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEFLKDYIDYIIFAILGFMSFLSVWFSCERLIFYMRINLNDYQNEEILEEVLSKNLTALYIIYSNAPYVGLLGTVIGIMI
TFYDMGMSGGMDAQSIMIGLSTALKATALGLVVAIPTLIVYNCFVRKMDVQLNRYKLSKKDINER

Sequences:

>Translated_145_residues
MEFLKDYIDYIIFAILGFMSFLSVWFSCERLIFYMRINLNDYQNEEILEEVLSKNLTALYIIYSNAPYVGLLGTVIGIMI
TFYDMGMSGGMDAQSIMIGLSTALKATALGLVVAIPTLIVYNCFVRKMDVQLNRYKLSKKDINER
>Mature_145_residues
MEFLKDYIDYIIFAILGFMSFLSVWFSCERLIFYMRINLNDYQNEEILEEVLSKNLTALYIIYSNAPYVGLLGTVIGIMI
TFYDMGMSGGMDAQSIMIGLSTALKATALGLVVAIPTLIVYNCFVRKMDVQLNRYKLSKKDINER

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014172 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 16605; Mature: 16605

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLKDYIDYIIFAILGFMSFLSVWFSCERLIFYMRINLNDYQNEEILEEVLSKNLTALY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCEEEE
IIYSNAPYVGLLGTVIGIMITFYDMGMSGGMDAQSIMIGLSTALKATALGLVVAIPTLIV
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNCFVRKMDVQLNRYKLSKKDINER
HHHHHHHHHHHHHHHCCCHHCCCCC
>Mature Secondary Structure
MEFLKDYIDYIIFAILGFMSFLSVWFSCERLIFYMRINLNDYQNEEILEEVLSKNLTALY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCEEEE
IIYSNAPYVGLLGTVIGIMITFYDMGMSGGMDAQSIMIGLSTALKATALGLVVAIPTLIV
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNCFVRKMDVQLNRYKLSKKDINER
HHHHHHHHHHHHHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]