| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265837
Identifier: 32265837
GI number: 32265837
Start: 332213
End: 333103
Strand: Direct
Name: 32265837
Synonym: HH0338
Alternate gene names: NA
Gene position: 332213-333103 (Clockwise)
Preceding gene: 32265836
Following gene: 32265838
Centisome position: 18.47
GC content: 38.83
Gene sequence:
>891_bases ATGAAAATGCCCTCTATGATCCGTGTAGCACTTGTGCAGCAAGCCTACAAAGGAAATAAAGAGGCAATGATAGAATCAAG TGCTGCAATGATTGCTAAAGCGGCACATTCTAACGCACAACTTGTAGCATTACAAGAGCTTCATACACACGAATATTTTT GTCAAAGTGAGAATCCACAATTTTTTGATTATGCAATGGATTTTGATAAAGATGTGGCATATTTTAGCGCATTAGCTAAA AAGCATAAAATCGTGCTTATTACTTCACTTTTTGAAAAACGTGCTGCAGGGCTATATCACAATACCGCTGTTGTTTTTGA TATTGATGGCTCTATAGCTGGAAAATACCGCAAAATGCACATTCCTGATGACCCACAATTTTATGAGAAATTCTACTTCA CACCCGGTGATTTAGGATTTGAGCCCATATCTACAAGTTTAGGGAAACTTGGTGTGCTTATTTGCTGGGACCAATGGTAT CCCGAAGCAGCACGTATTATGGCACTAAAGGGAGCGCAAATGCTTATTTATCCTACTGCTATTGGGTGGTTTGATGAAGA TACTTTAGAGGAGAAAACACGCCAAAAAGAAGCGTGGATAGCTGTGCAAAGAGGACATAGTGTTGCGAATGGATTACCTA CAATGGCAATTAACCGCGTGGGTTTTGAATCTGATAGCAGTAAGGTAGGGAATGGCATACGATTTTGGGGTTCAAGCTTT GTATTTGGTGCACAAGGTGAGCTTTTGGCACAAGGAAGTGAGAATAAAGAAGAAATTATTTTAGTAGAAATTGATTTACA AAGAAGTGAAGAAGTGCGCCGTATGTGGCCATTTTTACGCGATAGACGCATAGAATCTTATAGTGAAATTCTTAAACGAT TTTGTGATTAA
Upstream 100 bases:
>100_bases TGAGGATTTCGAAGATTATGATGATGATTATTCATACAATGCGTATGATGATGACGATTATCAAAGCCCCGATAGCGAAT ATGATGAATAAGGATTTTTA
Downstream 100 bases:
>100_bases AACTATTTTAATACCCTATTAAATATGCTTATTATTCAACATAATTTAATGTTTATAGGTATAGAATAACCCGTTTCAAT GAAACAATCTTTACAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKMPSMIRVALVQQAYKGNKEAMIESSAAMIAKAAHSNAQLVALQELHTHEYFCQSENPQFFDYAMDFDKDVAYFSALAK KHKIVLITSLFEKRAAGLYHNTAVVFDIDGSIAGKYRKMHIPDDPQFYEKFYFTPGDLGFEPISTSLGKLGVLICWDQWY PEAARIMALKGAQMLIYPTAIGWFDEDTLEEKTRQKEAWIAVQRGHSVANGLPTMAINRVGFESDSSKVGNGIRFWGSSF VFGAQGELLAQGSENKEEIILVEIDLQRSEEVRRMWPFLRDRRIESYSEILKRFCD
Sequences:
>Translated_296_residues MKMPSMIRVALVQQAYKGNKEAMIESSAAMIAKAAHSNAQLVALQELHTHEYFCQSENPQFFDYAMDFDKDVAYFSALAK KHKIVLITSLFEKRAAGLYHNTAVVFDIDGSIAGKYRKMHIPDDPQFYEKFYFTPGDLGFEPISTSLGKLGVLICWDQWY PEAARIMALKGAQMLIYPTAIGWFDEDTLEEKTRQKEAWIAVQRGHSVANGLPTMAINRVGFESDSSKVGNGIRFWGSSF VFGAQGELLAQGSENKEEIILVEIDLQRSEEVRRMWPFLRDRRIESYSEILKRFCD >Mature_296_residues MKMPSMIRVALVQQAYKGNKEAMIESSAAMIAKAAHSNAQLVALQELHTHEYFCQSENPQFFDYAMDFDKDVAYFSALAK KHKIVLITSLFEKRAAGLYHNTAVVFDIDGSIAGKYRKMHIPDDPQFYEKFYFTPGDLGFEPISTSLGKLGVLICWDQWY PEAARIMALKGAQMLIYPTAIGWFDEDTLEEKTRQKEAWIAVQRGHSVANGLPTMAINRVGFESDSSKVGNGIRFWGSSF VFGAQGELLAQGSENKEEIILVEIDLQRSEEVRRMWPFLRDRRIESYSEILKRFCD
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=292, Percent_Identity=29.4520547945205, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI7706509, Length=314, Percent_Identity=27.0700636942675, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI297632350, Length=292, Percent_Identity=23.2876712328767, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI297632348, Length=292, Percent_Identity=23.2876712328767, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI5031947, Length=292, Percent_Identity=23.2876712328767, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17533173, Length=311, Percent_Identity=28.2958199356913, Blast_Score=124, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17556280, Length=289, Percent_Identity=26.643598615917, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323383, Length=300, Percent_Identity=29.6666666666667, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI21358471, Length=311, Percent_Identity=28.9389067524116, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI17933642, Length=285, Percent_Identity=24.2105263157895, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI21355835, Length=296, Percent_Identity=25, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 33709; Mature: 33709
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPSMIRVALVQQAYKGNKEAMIESSAAMIAKAAHSNAQLVALQELHTHEYFCQSENPQ CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCC FFDYAMDFDKDVAYFSALAKKHKIVLITSLFEKRAAGLYHNTAVVFDIDGSIAGKYRKMH EEEHECCCCHHHHHHHHHHHCCEEEEEEHHHHHHHCCCEECEEEEEEECCCCCCCEEEEC IPDDPQFYEKFYFTPGDLGFEPISTSLGKLGVLICWDQWYPEAARIMALKGAQMLIYPTA CCCCHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHEEEECCCEEEEEEEE IGWFDEDTLEEKTRQKEAWIAVQRGHSVANGLPTMAINRVGFESDSSKVGNGIRFWGSSF CCCCCCHHHHHHHHHHHHEEEEECCCHHHCCCCHHEEHHCCCCCCCHHHCCCEEECCCCE VFGAQGELLAQGSENKEEIILVEIDLQRSEEVRRMWPFLRDRRIESYSEILKRFCD EECCCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKMPSMIRVALVQQAYKGNKEAMIESSAAMIAKAAHSNAQLVALQELHTHEYFCQSENPQ CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCC FFDYAMDFDKDVAYFSALAKKHKIVLITSLFEKRAAGLYHNTAVVFDIDGSIAGKYRKMH EEEHECCCCHHHHHHHHHHHCCEEEEEEHHHHHHHCCCEECEEEEEEECCCCCCCEEEEC IPDDPQFYEKFYFTPGDLGFEPISTSLGKLGVLICWDQWYPEAARIMALKGAQMLIYPTA CCCCHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHEEEECCCEEEEEEEE IGWFDEDTLEEKTRQKEAWIAVQRGHSVANGLPTMAINRVGFESDSSKVGNGIRFWGSSF CCCCCCHHHHHHHHHHHHEEEEECCCHHHCCCCHHEEHHCCCCCCCHHHCCCEEECCCCE VFGAQGELLAQGSENKEEIILVEIDLQRSEEVRRMWPFLRDRRIESYSEILKRFCD EECCCCCEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]