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The map label for this gene is panD

Identifier: 32265830

GI number: 32265830

Start: 327821

End: 328333

Strand: Direct

Name: panD

Synonym: HH0331

Alternate gene names: 32265830

Gene position: 327821-328333 (Clockwise)

Preceding gene: 32265829

Following gene: 32265831

Centisome position: 18.22

GC content: 30.41

Gene sequence:

>513_bases
TTGATAATAAGATTCTTATATGGAATAATCAATAAGAAAGCTTACTCCAAGCCTTATCTGATTAATTTATTTACTCATCA
TATAATGATATTACATATTTTTATGATAAAATTACACTATTTTTATATCCCAAATCAAATAAGGCATAAAATGCAATTTG
AAATGCTTTACTCAAAGATTCATCGTGCTAAAGTCAGTGATGCTAATCTTAATTATGTCGGCTCAATTACGATTGATAAA
ACACTTGCCCAAAGTGCAAATCTTTTAGCAGGTATGAAAGTAGAGATTGTGAATATCAATAATGGCGAACGTTTTAGCAC
TTATGTCATTTATGGCGATAAAAAGGGTGAAATTTGTCTCAATGGAGCTGCTGCACGCAAAGTTCAAATAGGCGATATTA
TTATAATAATTGCTTATGCCACATATACCCACAATGAGCTTGAACACTATAAACCTACTATTGTGCAAGTCAATGAATCT
AATCAGATTCTATCTATTACAAATGAGGTGTAA

Upstream 100 bases:

>100_bases
AATATCTCTCCAAAAAGTCTACGAAGCTATAAACTTGAAGAATACTCAACACAATTCCATAAAGATATACACATTTTAGA
AGAAATCCCAAATACGCATA

Downstream 100 bases:

>100_bases
CAATGTTTGATGCAAAACAACTTGGAGCAATGCTTGGCTCTATGCAAGATACTATCAAAGATTTGCAAGAACGCAATGAA
CAAACAATTCTTAGTGCTAA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MIIRFLYGIINKKAYSKPYLINLFTHHIMILHIFMIKLHYFYIPNQIRHKMQFEMLYSKIHRAKVSDANLNYVGSITIDK
TLAQSANLLAGMKVEIVNINNGERFSTYVIYGDKKGEICLNGAAARKVQIGDIIIIIAYATYTHNELEHYKPTIVQVNES
NQILSITNEV

Sequences:

>Translated_170_residues
MIIRFLYGIINKKAYSKPYLINLFTHHIMILHIFMIKLHYFYIPNQIRHKMQFEMLYSKIHRAKVSDANLNYVGSITIDK
TLAQSANLLAGMKVEIVNINNGERFSTYVIYGDKKGEICLNGAAARKVQIGDIIIIIAYATYTHNELEHYKPTIVQVNES
NQILSITNEV
>Mature_170_residues
MIIRFLYGIINKKAYSKPYLINLFTHHIMILHIFMIKLHYFYIPNQIRHKMQFEMLYSKIHRAKVSDANLNYVGSITIDK
TLAQSANLLAGMKVEIVNINNGERFSTYVIYGDKKGEICLNGAAARKVQIGDIIIIIAYATYTHNELEHYKPTIVQVNES
NQILSITNEV

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=110, Percent_Identity=37.2727272727273, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 19607; Mature: 19607

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRFLYGIINKKAYSKPYLINLFTHHIMILHIFMIKLHYFYIPNQIRHKMQFEMLYSKI
CHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHH
HRAKVSDANLNYVGSITIDKTLAQSANLLAGMKVEIVNINNGERFSTYVIYGDKKGEICL
HHCCCCCCCCEEEEEEEEHHHHHHCCCCEECCEEEEEECCCCCEEEEEEEEECCCCCEEE
NGAAARKVQIGDIIIIIAYATYTHNELEHYKPTIVQVNESNQILSITNEV
ECCCCCEEEECCEEEEEEEEECCCCCHHHCCCEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MIIRFLYGIINKKAYSKPYLINLFTHHIMILHIFMIKLHYFYIPNQIRHKMQFEMLYSKI
CHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHH
HRAKVSDANLNYVGSITIDKTLAQSANLLAGMKVEIVNINNGERFSTYVIYGDKKGEICL
HHCCCCCCCCEEEEEEEEHHHHHHCCCCEECCEEEEEECCCCCEEEEEEEEECCCCCEEE
NGAAARKVQIGDIIIIIAYATYTHNELEHYKPTIVQVNESNQILSITNEV
ECCCCCEEEECCEEEEEEEEECCCCCHHHCCCEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]