| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265811
Identifier: 32265811
GI number: 32265811
Start: 307144
End: 307872
Strand: Direct
Name: 32265811
Synonym: HH0312
Alternate gene names: NA
Gene position: 307144-307872 (Clockwise)
Preceding gene: 32265804
Following gene: 161546634
Centisome position: 17.07
GC content: 38.0
Gene sequence:
>729_bases TTGCGATGTGAAATTATAACTAAAAGTGGCAATATTATGTTAAAAGCTTTGAAAGATTCTTATCCATTTGCCCGCGCAAT TCATATTCAGCACAAAGCCATTAAGTATCCTCGCTTGATTATCAAAGCCGATTTATCCTTATTTGTGCGTGTGCCACTTA GATTCCCTATGCAAGAATTACAAGCCTTTATCCGCAAACACCACAAATGGATAGAATCCACTCTTTTAAAACTCCACGAT TGCAACGCACACACACAAAGCATTTTACAAGCCCATAGCGATGAGATTCTTATCTTTGGCTCTTGGCAAAGATTATCCTC CTTAACCTCATTCTATTCACACGCTCAATCTCTCCTCACCTTATCACCACAGAATCTAAAAGCACCACTTAAATCCATAC TTTTGGATTATATCTGCTCTCGTGCGCCTCAAATCGCTGCGACTATGGGAGTGCAATATCAAAGTATCAAAATTACAAAT GCTCTTACTCGCTTTGGGAGCTGCACCTATGATAATCGTTTGTTTTTCTCTTTTATGCTTATTTTTGCGCCAAAAGAGCT CATTGATTATGTCATTATCCACGAGCTCGCACATATTCGTTACAAAAACCATTCACAGGATTTTTGGGATTTTGTGCAAA GATATTGTCCAAATGCTAAAACTCATCGTGCACAACTACGCAAACACGCTAAATTCTACCCTGCTTTATTACAAAGACTT TCTTTATAA
Upstream 100 bases:
>100_bases GCCCATAACCATCTTTTACTTCAACAATCTCGCCCTTTTTACCAAGCCCTTGCACATTTTCCAAAAGTAGAACTTTCATA TTTTCTCCATTGCGTTATAA
Downstream 100 bases:
>100_bases ATCTTTTTTATTTTCCTAGTCTCCGCAACCTCTTTTCCGCTCCATCAAAGAACATAAGTTTTATTTGTGAAGTATGAATA TAACCTATGATTGCTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Protease; Zinc-Dependent Protease; Zinc Metallopeptidase; Metalloprotease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQELQAFIRKHHKWIESTLLKLHD CNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLTLSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITN ALTRFGSCTYDNRLFFSFMLIFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL SL
Sequences:
>Translated_242_residues MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQELQAFIRKHHKWIESTLLKLHD CNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLTLSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITN ALTRFGSCTYDNRLFFSFMLIFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL SL >Mature_242_residues MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQELQAFIRKHHKWIESTLLKLHD CNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLTLSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITN ALTRFGSCTYDNRLFFSFMLIFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL SL
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28257; Mature: 28257
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQEL CCEEEEECCCCEEEEEHHCCCCHHHHHHHHHHHHHCCHHHEEHHHHHEEECCCCCCHHHH QAFIRKHHKWIESTLLKLHDCNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH LSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITNALTRFGSCTYDNRLFFSFML CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHH IFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL HHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SL CC >Mature Secondary Structure MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQEL CCEEEEECCCCEEEEEHHCCCCHHHHHHHHHHHHHCCHHHEEHHHHHEEECCCCCCHHHH QAFIRKHHKWIESTLLKLHDCNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH LSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITNALTRFGSCTYDNRLFFSFML CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHH IFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL HHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA