Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is 32265811

Identifier: 32265811

GI number: 32265811

Start: 307144

End: 307872

Strand: Direct

Name: 32265811

Synonym: HH0312

Alternate gene names: NA

Gene position: 307144-307872 (Clockwise)

Preceding gene: 32265804

Following gene: 161546634

Centisome position: 17.07

GC content: 38.0

Gene sequence:

>729_bases
TTGCGATGTGAAATTATAACTAAAAGTGGCAATATTATGTTAAAAGCTTTGAAAGATTCTTATCCATTTGCCCGCGCAAT
TCATATTCAGCACAAAGCCATTAAGTATCCTCGCTTGATTATCAAAGCCGATTTATCCTTATTTGTGCGTGTGCCACTTA
GATTCCCTATGCAAGAATTACAAGCCTTTATCCGCAAACACCACAAATGGATAGAATCCACTCTTTTAAAACTCCACGAT
TGCAACGCACACACACAAAGCATTTTACAAGCCCATAGCGATGAGATTCTTATCTTTGGCTCTTGGCAAAGATTATCCTC
CTTAACCTCATTCTATTCACACGCTCAATCTCTCCTCACCTTATCACCACAGAATCTAAAAGCACCACTTAAATCCATAC
TTTTGGATTATATCTGCTCTCGTGCGCCTCAAATCGCTGCGACTATGGGAGTGCAATATCAAAGTATCAAAATTACAAAT
GCTCTTACTCGCTTTGGGAGCTGCACCTATGATAATCGTTTGTTTTTCTCTTTTATGCTTATTTTTGCGCCAAAAGAGCT
CATTGATTATGTCATTATCCACGAGCTCGCACATATTCGTTACAAAAACCATTCACAGGATTTTTGGGATTTTGTGCAAA
GATATTGTCCAAATGCTAAAACTCATCGTGCACAACTACGCAAACACGCTAAATTCTACCCTGCTTTATTACAAAGACTT
TCTTTATAA

Upstream 100 bases:

>100_bases
GCCCATAACCATCTTTTACTTCAACAATCTCGCCCTTTTTACCAAGCCCTTGCACATTTTCCAAAAGTAGAACTTTCATA
TTTTCTCCATTGCGTTATAA

Downstream 100 bases:

>100_bases
ATCTTTTTTATTTTCCTAGTCTCCGCAACCTCTTTTCCGCTCCATCAAAGAACATAAGTTTTATTTGTGAAGTATGAATA
TAACCTATGATTGCTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Protease; Zinc-Dependent Protease; Zinc Metallopeptidase; Metalloprotease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQELQAFIRKHHKWIESTLLKLHD
CNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLTLSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITN
ALTRFGSCTYDNRLFFSFMLIFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL
SL

Sequences:

>Translated_242_residues
MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQELQAFIRKHHKWIESTLLKLHD
CNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLTLSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITN
ALTRFGSCTYDNRLFFSFMLIFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL
SL
>Mature_242_residues
MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQELQAFIRKHHKWIESTLLKLHD
CNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLTLSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITN
ALTRFGSCTYDNRLFFSFMLIFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL
SL

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28257; Mature: 28257

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQEL
CCEEEEECCCCEEEEEHHCCCCHHHHHHHHHHHHHCCHHHEEHHHHHEEECCCCCCHHHH
QAFIRKHHKWIESTLLKLHDCNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH
LSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITNALTRFGSCTYDNRLFFSFML
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHH
IFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL
HHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SL
CC
>Mature Secondary Structure
MRCEIITKSGNIMLKALKDSYPFARAIHIQHKAIKYPRLIIKADLSLFVRVPLRFPMQEL
CCEEEEECCCCEEEEEHHCCCCHHHHHHHHHHHHHCCHHHEEHHHHHEEECCCCCCHHHH
QAFIRKHHKWIESTLLKLHDCNAHTQSILQAHSDEILIFGSWQRLSSLTSFYSHAQSLLT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH
LSPQNLKAPLKSILLDYICSRAPQIAATMGVQYQSIKITNALTRFGSCTYDNRLFFSFML
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHH
IFAPKELIDYVIIHELAHIRYKNHSQDFWDFVQRYCPNAKTHRAQLRKHAKFYPALLQRL
HHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA