Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is 32265777

Identifier: 32265777

GI number: 32265777

Start: 274985

End: 275353

Strand: Direct

Name: 32265777

Synonym: HH0278

Alternate gene names: NA

Gene position: 274985-275353 (Clockwise)

Preceding gene: 32265776

Following gene: 32265778

Centisome position: 15.28

GC content: 28.46

Gene sequence:

>369_bases
TTGGCATTATTATCCATACCATTTAGAAAAGAAAAATTACAAAATCGTATAATGAACCTCAAAAAGTTAAAATTTAAAAA
GTATGATACAAGCAATAGGGAATACTTTTATAATGCGGGTAAGAAAGTGCGCTTTAGCAATATTGATAAGGTTGATATTG
TTTTAAGTCTTTTGCATAACCTTAGAAATCGTTGCTATCATTGGGAAAATATTAAAAAATGGCATTATGAAAATAATGCT
CGTTTTCCAAGGCTCACTACAAAAATAAAAGACACACTCATAGGCATATCCCCAACGCAAACAGAGATATTTCTCAAAGA
TATATTAGAAAGTTTCAATACAAAATTAACAAAATATTGCGAGATTTAA

Upstream 100 bases:

>100_bases
AAGTAATGATGATAAACAAATAAAGATGATTAGGTATTTTGCATAATTATGTTTATGTGAGTGATTGCGCTAAAAAACTT
TCTCTTATCTAGGCTTTCTT

Downstream 100 bases:

>100_bases
AGATACAAATAGTATTTAGCGAAGTTTCAAGAAGAGGTGGGCAACTCGTATGCCCTTCGAATTTCGCTTATGATTATACT
CCAAAAACTAAAAGAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MALLSIPFRKEKLQNRIMNLKKLKFKKYDTSNREYFYNAGKKVRFSNIDKVDIVLSLLHNLRNRCYHWENIKKWHYENNA
RFPRLTTKIKDTLIGISPTQTEIFLKDILESFNTKLTKYCEI

Sequences:

>Translated_122_residues
MALLSIPFRKEKLQNRIMNLKKLKFKKYDTSNREYFYNAGKKVRFSNIDKVDIVLSLLHNLRNRCYHWENIKKWHYENNA
RFPRLTTKIKDTLIGISPTQTEIFLKDILESFNTKLTKYCEI
>Mature_121_residues
ALLSIPFRKEKLQNRIMNLKKLKFKKYDTSNREYFYNAGKKVRFSNIDKVDIVLSLLHNLRNRCYHWENIKKWHYENNAR
FPRLTTKIKDTLIGISPTQTEIFLKDILESFNTKLTKYCEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14776; Mature: 14644

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLSIPFRKEKLQNRIMNLKKLKFKKYDTSNREYFYNAGKKVRFSNIDKVDIVLSLLHN
CCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHH
LRNRCYHWENIKKWHYENNARFPRLTTKIKDTLIGISPTQTEIFLKDILESFNTKLTKYC
HHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
EI
CC
>Mature Secondary Structure 
ALLSIPFRKEKLQNRIMNLKKLKFKKYDTSNREYFYNAGKKVRFSNIDKVDIVLSLLHN
CEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHH
LRNRCYHWENIKKWHYENNARFPRLTTKIKDTLIGISPTQTEIFLKDILESFNTKLTKYC
HHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
EI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA