Click here to switch to the map view.

The map label for this gene is nrfH [H]

Identifier: 32265714

GI number: 32265714

Start: 205388

End: 205894

Strand: Direct

Name: nrfH [H]

Synonym: HH0215

Alternate gene names: 32265714

Gene position: 205388-205894 (Clockwise)

Preceding gene: 32265712

Following gene: 32265715

Centisome position: 11.42

GC content: 40.04

Gene sequence:

>507_bases
GTGAAACAGGACAGACAGAAACGACCCACTCTTATGTCAAGTATTTTCGCTATTCTTCTCATAGCTATTGTTATTATTGC
GTGTTATACATTTTGGCACGCTAAGGGAGCTTCTTATCTTAGCAATGATTCGGAAGCGTGCAATAATTGTCATATTATGA
ATGAAGTTTATAGTGATTATCTTAGCGCTCCTCATTCACAGAAAATTGCAGGGCAGCCTCGAGCTACCTGTAATGACTGC
CATTTGCCTCACAACTTTGTCTCCAAATGGATTGCTAAAGCTCAAAGTGGCGTAGGACACGCTTATGCTTTTACATTCAA
GCTTGATACACTACCTACTAACTTGAGTGCAAATGAAACAAGTAAGCAAATGGTGCAAAATAATTGTGTGCGTTGTCATA
TAGAATATGTCCAAAACGCAGTCAATCCTACGACTACGCCTGGACATAACAACGCACTAAATTGTGTCTCTTGCCACGAG
AGTGCAGGACATAAACGAGGTTTTTAA

Upstream 100 bases:

>100_bases
TTTGATAAAAATCAAATCATTTTATTATTGATAATATTAGAATTCTAACGAGTATTTTCTTAAAGATTCTCACTCACACA
ACACAAATAAGGAGGGTTTA

Downstream 100 bases:

>100_bases
CTTAAATTTTAAGGAGGAATAGATGCAAAAAAATAAAGGAATGCTACCTATACTTATCGTTGGAGCTGTTATTATTATTG
TTGGACTTTTATGGCTCAAT

Product: hypothetical protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKQDRQKRPTLMSSIFAILLIAIVIIACYTFWHAKGASYLSNDSEACNNCHIMNEVYSDYLSAPHSQKIAGQPRATCNDC
HLPHNFVSKWIAKAQSGVGHAYAFTFKLDTLPTNLSANETSKQMVQNNCVRCHIEYVQNAVNPTTTPGHNNALNCVSCHE
SAGHKRGF

Sequences:

>Translated_168_residues
MKQDRQKRPTLMSSIFAILLIAIVIIACYTFWHAKGASYLSNDSEACNNCHIMNEVYSDYLSAPHSQKIAGQPRATCNDC
HLPHNFVSKWIAKAQSGVGHAYAFTFKLDTLPTNLSANETSKQMVQNNCVRCHIEYVQNAVNPTTTPGHNNALNCVSCHE
SAGHKRGF
>Mature_168_residues
MKQDRQKRPTLMSSIFAILLIAIVIIACYTFWHAKGASYLSNDSEACNNCHIMNEVYSDYLSAPHSQKIAGQPRATCNDC
HLPHNFVSKWIAKAQSGVGHAYAFTFKLDTLPTNLSANETSKQMVQNNCVRCHIEYVQNAVNPTTTPGHNNALNCVSCHE
SAGHKRGF

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=163, Percent_Identity=30.0613496932515, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 18642; Mature: 18642

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDRQKRPTLMSSIFAILLIAIVIIACYTFWHAKGASYLSNDSEACNNCHIMNEVYSDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
LSAPHSQKIAGQPRATCNDCHLPHNFVSKWIAKAQSGVGHAYAFTFKLDTLPTNLSANET
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHH
SKQMVQNNCVRCHIEYVQNAVNPTTTPGHNNALNCVSCHESAGHKRGF
HHHHHHCCHHEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQDRQKRPTLMSSIFAILLIAIVIIACYTFWHAKGASYLSNDSEACNNCHIMNEVYSDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
LSAPHSQKIAGQPRATCNDCHLPHNFVSKWIAKAQSGVGHAYAFTFKLDTLPTNLSANET
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHH
SKQMVQNNCVRCHIEYVQNAVNPTTTPGHNNALNCVSCHESAGHKRGF
HHHHHHCCHHEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]