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The map label for this gene is napD

Identifier: 32265662

GI number: 32265662

Start: 157637

End: 157996

Strand: Direct

Name: napD

Synonym: HH0163

Alternate gene names: 32265662

Gene position: 157637-157996 (Clockwise)

Preceding gene: 32265661

Following gene: 32265665

Centisome position: 8.76

GC content: 33.61

Gene sequence:

>360_bases
ATGAATATCTCAAGTATCGTTGTGAAAACTACTCAAGAAAGTTTTGAATCTGTAAAAAATGCTATTAAAGAAATACAGGG
TTGTGAAATATATATTGAAGACAAAGCTACAAATCAGCTTATTGTCGTTATAGAATCTCAAAACACCGAAGAAGAAGTAG
CTATTAACAAACATATAGAATCTATGGCGGGAGTAATGAGCGCAAATATGCACTATGCCTATCAAGAAGATGAGATTAAC
GCACAACTTAAATCCATAGATGGTGGTATAAGCGAGTTTCTCAATAATGATTCTATCCCTGCTGAAAATATTGCTTACTC
TGGTTCTATAGCACATCTTATGGGGAAAAAGCGCAAATAA

Upstream 100 bases:

>100_bases
TTATTAATAGTCTTATTTTTTATGATAAAAATACACTCATTTCAGGCAATGATGATAAAACATTTATCATTTGGAAACTG
CCAAAATCTAAGGAGAAATA

Downstream 100 bases:

>100_bases
ATATTTTTTTATTTCATTTACATAACAGAGGTTTTAATTCTTATGATTCTATAGTCCCTTTTGTATCCATAAACTTAGTG
ATGCAACCCGCTCTCATATA

Product: periplasmic nitrate reductase component NapD

Products: reduced acceptor; NO3- [C]

Alternate protein names: Periplasmic Nitrate Reductase NapD; NapD Family Protein; Napd Family Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNISSIVVKTTQESFESVKNAIKEIQGCEIYIEDKATNQLIVVIESQNTEEEVAINKHIESMAGVMSANMHYAYQEDEIN
AQLKSIDGGISEFLNNDSIPAENIAYSGSIAHLMGKKRK

Sequences:

>Translated_119_residues
MNISSIVVKTTQESFESVKNAIKEIQGCEIYIEDKATNQLIVVIESQNTEEEVAINKHIESMAGVMSANMHYAYQEDEIN
AQLKSIDGGISEFLNNDSIPAENIAYSGSIAHLMGKKRK
>Mature_119_residues
MNISSIVVKTTQESFESVKNAIKEIQGCEIYIEDKATNQLIVVIESQNTEEEVAINKHIESMAGVMSANMHYAYQEDEIN
AQLKSIDGGISEFLNNDSIPAENIAYSGSIAHLMGKKRK

Specific function: Plays A Role In The Correct Assembly Of Subunits Of The Periplasmic Napab Enzyme. [C]

COG id: COG3062

COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13180; Mature: 13180

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISSIVVKTTQESFESVKNAIKEIQGCEIYIEDKATNQLIVVIESQNTEEEVAINKHIE
CCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
SMAGVMSANMHYAYQEDEINAQLKSIDGGISEFLNNDSIPAENIAYSGSIAHLMGKKRK
HHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHCCCCCCCCCEECCCCHHHHCCCCCC
>Mature Secondary Structure
MNISSIVVKTTQESFESVKNAIKEIQGCEIYIEDKATNQLIVVIESQNTEEEVAINKHIE
CCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
SMAGVMSANMHYAYQEDEINAQLKSIDGGISEFLNNDSIPAENIAYSGSIAHLMGKKRK
HHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHCCCCCCCCCEECCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA