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The map label for this gene is ycfF [C]

Identifier: 32265528

GI number: 32265528

Start: 34349

End: 34690

Strand: Direct

Name: ycfF [C]

Synonym: HH0029

Alternate gene names: 32265528

Gene position: 34349-34690 (Clockwise)

Preceding gene: 32265523

Following gene: 32265529

Centisome position: 1.91

GC content: 36.84

Gene sequence:

>342_bases
ATGGCAGAAAAAACGATTTTTGAAAAAATTGTAGCAGGCGAGATTCCTTGTAAAAAAGTGCTTGAAAATGAGCGATTTCT
TGCTTTTTATGATATTAATCCCAAAGCCCCTGTGCATATTCTCGCTATTCCTAAAGTGTGTGTAAAAGATTTTGATTGTG
CAGATTCTAAACTTTTAGGAGAGTTGTGTGGTTTTGCGCAAGAAGTTACCAAATCGGTAGGCATTGATAAAAGCGGATAT
AGAATCATTACCAATATCGGTGCTGATGGTGGGCAAGAAGTCCCACATTTGCATTTGCATATTCTTGGCGGTGGCAAATT
AAAATTTCCTTCACTTGTATAA

Upstream 100 bases:

>100_bases
TCGGCATTGTAGCATATTATAGATTCTATTCAGGTTTAAAAGTTATAATATCAATTCTTTTTTATCAAACCACTATAAAA
AGAGACTTTAAGGAGCGAAT

Downstream 100 bases:

>100_bases
AATAATTATTGCAAAGATATTGAATGCAAGAAGACGCACTCAAATGGAATGCTCGGTATCAAGAGGGCTTTATGCCCAAT
GAACCAAGCCCATTTGTGCT

Product: HIT hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAEKTIFEKIVAGEIPCKKVLENERFLAFYDINPKAPVHILAIPKVCVKDFDCADSKLLGELCGFAQEVTKSVGIDKSGY
RIITNIGADGGQEVPHLHLHILGGGKLKFPSLV

Sequences:

>Translated_113_residues
MAEKTIFEKIVAGEIPCKKVLENERFLAFYDINPKAPVHILAIPKVCVKDFDCADSKLLGELCGFAQEVTKSVGIDKSGY
RIITNIGADGGQEVPHLHLHILGGGKLKFPSLV
>Mature_112_residues
AEKTIFEKIVAGEIPCKKVLENERFLAFYDINPKAPVHILAIPKVCVKDFDCADSKLLGELCGFAQEVTKSVGIDKSGYR
IITNIGADGGQEVPHLHLHILGGGKLKFPSLV

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=109, Percent_Identity=45.8715596330275, Blast_Score=100, Evalue=3e-22,
Organism=Homo sapiens, GI14211923, Length=112, Percent_Identity=40.1785714285714, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787346, Length=110, Percent_Identity=43.6363636363636, Blast_Score=87, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17506713, Length=112, Percent_Identity=44.6428571428571, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=42.8571428571429, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=42.8571428571429, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12305; Mature: 12173

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKTIFEKIVAGEIPCKKVLENERFLAFYDINPKAPVHILAIPKVCVKDFDCADSKLLG
CCCHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCCEEEEECCHHHHCCCCCCCHHHHH
ELCGFAQEVTKSVGIDKSGYRIITNIGADGGQEVPHLHLHILGGGKLKFPSLV
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
AEKTIFEKIVAGEIPCKKVLENERFLAFYDINPKAPVHILAIPKVCVKDFDCADSKLLG
CCHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCCEEEEECCHHHHCCCCCCCHHHHH
ELCGFAQEVTKSVGIDKSGYRIITNIGADGGQEVPHLHLHILGGGKLKFPSLV
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]