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The map label for this gene is ygiC

Identifier: 32265514

GI number: 32265514

Start: 13936

End: 15108

Strand: Direct

Name: ygiC

Synonym: HH0015

Alternate gene names: 32265514

Gene position: 13936-15108 (Clockwise)

Preceding gene: 32265513

Following gene: 32265517

Centisome position: 0.77

GC content: 36.4

Gene sequence:

>1173_bases
ATGACAATTACTAATATTTCACTTCCTGATAAAAATGTTTTAGAATCTATGGGGCTTACTTGGCATACAGATATGGACAA
TACCTCATATCTTAGTGATGAGCTTATACACATAAGCGGAGCAGAGGCAGAGGCTTACTATGAGGCAGGAAATGAGCTTT
ATGATATGTTTATAGAAGCTGGAGGGTATGTGATAAAAAACGACTTATTCTTTGAGCTAGACATTCCACCAAGTCTTATT
GGTGCGATAAAACAAAGCTGGGAAGAAGATATACATTGGCATTTATATGGGCGGTTTGATTTGGCTGGTGGGCTTGATGG
CACACCGATTAAACTTTTAGAATTTAATGCAGATACGCCGACTATGCTCTATGAAAGCGCACTTTTGCAATGGGCATTAC
TTAAGCATAATGGGCTTGATGAGGAGGCACAATTTAATAATATCCATAATGCTTTGAGTGAAAACTTTAAACGATTAATC
ACCCTTGAAGATGATACTTCTCGTTTTGAGGAGCTATATGAGGGTTGGAAAATTCTATTTTCTTGTATTTCAGATTCTTA
TGAAGATATTACAACTACGCGCTTTTTAGAGTATATCGCTAAAGAATCTGGCTTTATATGCGATTTTGCACCTATTGATG
TTATCAATTTCTCTGCCACAGAGGGTGTAAGCCATAATGGCATAAATTATGAATTTCTTTTCAAACTCATTCCGTGGGAA
AATATCGCTATTGATGAGCCTGAACTCGCACTTTTAATGAGTGAAATGATGCAAAATCATAATACAATTTTTCTTAATCC
CGCCTACACATTGCTTTTTCAAAGTAAAAGAATGCTGAAGATTCTATGGGATTTATTTCCTAATCACCCTTTGCTACTTC
CTGCTGATTTCTCACCTCTTCAAAATACCAAACAAGTATGCAAAAGGGCATTTGGGCGCGAGGGAGCAAATGTGGAGATT
CTCAATACACAAGGGCAAAGTATAGAATCTAAAAGTGGCATTTATGGTAATCACAAGCCTGTGTATCAAGCCTTTTATGA
GCTAAATACTCACAATGGTGCATTTTATCAACCAAATGTCTTTTTTGCTTATGAATCTTGTGGCTTAGGATTCCGTAAAG
GTGGGCTTATCATTGATAATTACTCAAAATTTGTAAGCCATTGTATTCAGTAA

Upstream 100 bases:

>100_bases
GCAAGCAAAACAAGTAGTGGCAAAAGTGGATTCTTTGGAGGGGGCAATAGCTCTCAATCAACAAGCACAAACAGAAATAC
AGGCAGTATGGGGAGCTAAT

Downstream 100 bases:

>100_bases
TTACTTATTTGGCTTTTGTGGATATAGCCTAGTATAGCTTTTTTTGCGTCATTTACATTTGGCGGAAAATAAAGCACTTT
TATCCATTGTGTTTTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTITNISLPDKNVLESMGLTWHTDMDNTSYLSDELIHISGAEAEAYYEAGNELYDMFIEAGGYVIKNDLFFELDIPPSLI
GAIKQSWEEDIHWHLYGRFDLAGGLDGTPIKLLEFNADTPTMLYESALLQWALLKHNGLDEEAQFNNIHNALSENFKRLI
TLEDDTSRFEELYEGWKILFSCISDSYEDITTTRFLEYIAKESGFICDFAPIDVINFSATEGVSHNGINYEFLFKLIPWE
NIAIDEPELALLMSEMMQNHNTIFLNPAYTLLFQSKRMLKILWDLFPNHPLLLPADFSPLQNTKQVCKRAFGREGANVEI
LNTQGQSIESKSGIYGNHKPVYQAFYELNTHNGAFYQPNVFFAYESCGLGFRKGGLIIDNYSKFVSHCIQ

Sequences:

>Translated_390_residues
MTITNISLPDKNVLESMGLTWHTDMDNTSYLSDELIHISGAEAEAYYEAGNELYDMFIEAGGYVIKNDLFFELDIPPSLI
GAIKQSWEEDIHWHLYGRFDLAGGLDGTPIKLLEFNADTPTMLYESALLQWALLKHNGLDEEAQFNNIHNALSENFKRLI
TLEDDTSRFEELYEGWKILFSCISDSYEDITTTRFLEYIAKESGFICDFAPIDVINFSATEGVSHNGINYEFLFKLIPWE
NIAIDEPELALLMSEMMQNHNTIFLNPAYTLLFQSKRMLKILWDLFPNHPLLLPADFSPLQNTKQVCKRAFGREGANVEI
LNTQGQSIESKSGIYGNHKPVYQAFYELNTHNGAFYQPNVFFAYESCGLGFRKGGLIIDNYSKFVSHCIQ
>Mature_389_residues
TITNISLPDKNVLESMGLTWHTDMDNTSYLSDELIHISGAEAEAYYEAGNELYDMFIEAGGYVIKNDLFFELDIPPSLIG
AIKQSWEEDIHWHLYGRFDLAGGLDGTPIKLLEFNADTPTMLYESALLQWALLKHNGLDEEAQFNNIHNALSENFKRLIT
LEDDTSRFEELYEGWKILFSCISDSYEDITTTRFLEYIAKESGFICDFAPIDVINFSATEGVSHNGINYEFLFKLIPWEN
IAIDEPELALLMSEMMQNHNTIFLNPAYTLLFQSKRMLKILWDLFPNHPLLLPADFSPLQNTKQVCKRAFGREGANVEIL
NTQGQSIESKSGIYGNHKPVYQAFYELNTHNGAFYQPNVFFAYESCGLGFRKGGLIIDNYSKFVSHCIQ

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=391, Percent_Identity=31.9693094629156, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1790629, Length=354, Percent_Identity=30.5084745762712, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1789361, Length=352, Percent_Identity=23.8636363636364, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44560; Mature: 44429

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITNISLPDKNVLESMGLTWHTDMDNTSYLSDELIHISGAEAEAYYEAGNELYDMFIEA
CEEECCCCCCHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHC
GGYVIKNDLFFELDIPPSLIGAIKQSWEEDIHWHLYGRFDLAGGLDGTPIKLLEFNADTP
CCEEEECCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCC
TMLYESALLQWALLKHNGLDEEAQFNNIHNALSENFKRLITLEDDTSRFEELYEGWKILF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH
SCISDSYEDITTTRFLEYIAKESGFICDFAPIDVINFSATEGVSHNGINYEFLFKLIPWE
HHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCC
NIAIDEPELALLMSEMMQNHNTIFLNPAYTLLFQSKRMLKILWDLFPNHPLLLPADFSPL
CCCCCCHHHHHHHHHHHHCCCEEEECHHEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCH
QNTKQVCKRAFGREGANVEILNTQGQSIESKSGIYGNHKPVYQAFYELNTHNGAFYQPNV
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCEECCCE
FFAYESCGLGFRKGGLIIDNYSKFVSHCIQ
EEEEECCCCCCCCCCEEEECHHHHHHHHCC
>Mature Secondary Structure 
TITNISLPDKNVLESMGLTWHTDMDNTSYLSDELIHISGAEAEAYYEAGNELYDMFIEA
EEECCCCCCHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHC
GGYVIKNDLFFELDIPPSLIGAIKQSWEEDIHWHLYGRFDLAGGLDGTPIKLLEFNADTP
CCEEEECCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCC
TMLYESALLQWALLKHNGLDEEAQFNNIHNALSENFKRLITLEDDTSRFEELYEGWKILF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH
SCISDSYEDITTTRFLEYIAKESGFICDFAPIDVINFSATEGVSHNGINYEFLFKLIPWE
HHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCC
NIAIDEPELALLMSEMMQNHNTIFLNPAYTLLFQSKRMLKILWDLFPNHPLLLPADFSPL
CCCCCCHHHHHHHHHHHHCCCEEEECHHEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCH
QNTKQVCKRAFGREGANVEILNTQGQSIESKSGIYGNHKPVYQAFYELNTHNGAFYQPNV
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCEECCCE
FFAYESCGLGFRKGGLIIDNYSKFVSHCIQ
EEEEECCCCCCCCCCEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]