Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32265500

Identifier: 32265500

GI number: 32265500

Start: 141

End: 2423

Strand: Direct

Name: 32265500

Synonym: HH0001

Alternate gene names: NA

Gene position: 141-2423 (Clockwise)

Preceding gene: NA

Following gene: 32265501

Centisome position: 0.01

GC content: 36.09

Gene sequence:

>2283_bases
ATGCAAAACACAAACATAGTGCAATATAAAACTTTTTTCATTGTGTTTTTACTTTCTATGGCTTTTTTCTCGCTCAAAGC
ACAAAACTATACTAGAAATCTTCCAAGCTCCATTATCTTGCAAAATGGAGAGAGTAGAAGCGATATTCTTACTTCAGTAT
GTGGGAATCAATATTGCGCATTTGGCTTAATGAGCAATAATGCTGGAAGCTATGACTTCAGCTATTCTACCCATAATGGT
TCTTCGAAGCTTTCTCTCGTTGCAAATACTCCTACAAATCCTTATAACCATAGGCATTCTGTATTTTATATGAGACATCT
TAATGTAGGAGAAAATTCAACATTAAGTATAAATGATTTTCATACATTTGCCCTCTCTGGTGGGCTTACACTTAATAATA
ATGCTGCTCTTGAGATTATTTTGCAAAAAGGAGAAAAAATACCTGCGAGTGAATTTGCCCCTTCATCAAAAGTGCATTTT
TCACGCAATGCAAATTTTTATCTTGGCAATGGCTCAACACTTAATATAAGCAATACTGATTTTGTCATAATAAGCTCTAA
AGGCATTATAAATAATAATGCACAAATGATTTTAGATTCTAGCACAATAAGATTCCAAAATACTCTCCACAATAAGGGCA
CAATAGAACTTACAGGAGATGTATATAACATAGGACAAAGCCAAACAATCACAAATCTTGGCACTTCGCATTTTATTAAT
TATGGCAATGTCAAAGTGAATGGGAATTTTTATAATGGTGGCACTCCGCGTGCTGATTCAGTGCAAGGAAGCTGGTGGCA
AAATGATGCACCAAGCCCGGGTGGAGGGAATCTTATAAACTATGGTGGAACAATTCATATTACGGGTAACCTTATTAATG
CGCAAGGCGTTGAACTTGGAAAAACACAAAATTCAAGTGTGCAAATTTATGGTGGCACAATCAAAGTTGATGGAGGAATG
AACAACGGAGCTAATAATACACTTATTTTAGGTTGGTATAATGGGAAAATGGGGCAGATTGATGGAAATGTAACCAATCG
TGGTATAGCTAAAGTTGATATTACAGGAGCAACGCTTAATACAGATCATAGAATCGCTGGTGGTTGGCATACTGGCAGGC
TTAATGCAAATCGAGATGTCTTACTAAATGGGAGCAAAAGTGAATTTTTAAACGCGAGAATTAGTCATTACCAAAATAGC
ACAACAATCACACTTAATAAAAACACTCAAGCCATTAACGCTTTTATGAACACTCTTCCTATACAATCAAAAACTATTCT
TACCGCGCTTGAAAATAGTCTTTACAATCCTAATACAATAGGACAACAAAGTATTTATGCTTATGGCAATAAAAATTACC
TTACAAAACTAGGAAATAATATTAATGAAAGCGCAGAATCTATGCTCCTTTATGCCTCTCCTTTAAATATATGGGCTATA
GTTCAAAATAGTATTATGCCGCTTAAAGCTCAAGTAACGCCCCCTCCGCGCAAATCTGTTTTAAACATAGCTCCTTTAAG
CTCTATTGCTTCACGTGGCTCACTTAAATCCCCTCTTAATGGTGTAAATATTAGTGCCCAAATTCCTTATAAGACACATT
TTCTTAGCGCTTTTGCTGCTTATGGAAATACAAACGCTACCCATACACTTACCCACTTGCAAACTCATTTTGACACAAAC
TCTTTTCTTGTAGGTTTATATGATAGAATCTCCCTACCATATATAGAAGTTTCACTCCTTGCATACTATGGTGCTAGTTT
TAACAAAGCTAAACGACATCTTTTATTAAACAACAGTGCTTTTCAAACACGCTATTCTTATCACGAGCTTGGTTTATCAG
CCCAAATCGCTCATCTATTGCGCTTTGAAAAACTATGGATAAAGCCATTTATAGGGATTAACTATGCTTTTGGCTTACAA
AGTGCCTTCAAAGAAAATCTTGTTTCAGATACCACCTCCGCTATGCTTACAGCTCCTATGTGGCTTTCTCATTTGCCACA
ACTCTCACTTGGCACACAAGGGCAATACTACTTAAAAAAGCAACACTTTCTCTTTGGAGGAGCGCAGATTCAATATGCAC
TCACAAATTCCTCTTTTTCCGCTCATTTTGGCTCTTCAGTTCTTAACTTTAACCCTCAAAATTCACTTGGGCTTACACTT
CATTTTGGTGGCTCTATGCCTATAGCTAAAGAATTCTCTCTTAGTGCTTATACATTTTATTCACGCTCACACTTGGCATT
TCAAAGTTATTCAGGCACAATCAATCTCTCATATTATTTCTAG

Upstream 100 bases:

>100_bases
TCTACATAACATAGTTAAAAAATTAAGTTTACTTGCATTATACTTTTAAGTTAAATATAAATCGTTCAATTAAATATAAA
TAAGTGACGGAAGGGGGATT

Downstream 100 bases:

>100_bases
GTGATTACCTCAAATATGTTACAATCGCTTCTTTCACAATACAGCAAAGGATAATAATATATGGTAGAAGTTTTAGCCAA
AATCACAACTCAACGCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 760; Mature: 760

Protein sequence:

>760_residues
MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCAFGLMSNNAGSYDFSYSTHNG
SSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDFHTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHF
SRNANFYLGNGSTLNISNTDFVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN
YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELGKTQNSSVQIYGGTIKVDGGM
NNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLNTDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNS
TTITLNKNTQAINAFMNTLPIQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI
VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAAYGNTNATHTLTHLQTHFDTN
SFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSAFQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQ
SAFKENLVSDTTSAMLTAPMWLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL
HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF

Sequences:

>Translated_760_residues
MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCAFGLMSNNAGSYDFSYSTHNG
SSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDFHTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHF
SRNANFYLGNGSTLNISNTDFVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN
YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELGKTQNSSVQIYGGTIKVDGGM
NNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLNTDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNS
TTITLNKNTQAINAFMNTLPIQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI
VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAAYGNTNATHTLTHLQTHFDTN
SFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSAFQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQ
SAFKENLVSDTTSAMLTAPMWLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL
HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF
>Mature_760_residues
MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCAFGLMSNNAGSYDFSYSTHNG
SSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDFHTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHF
SRNANFYLGNGSTLNISNTDFVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN
YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELGKTQNSSVQIYGGTIKVDGGM
NNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLNTDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNS
TTITLNKNTQAINAFMNTLPIQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI
VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAAYGNTNATHTLTHLQTHFDTN
SFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSAFQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQ
SAFKENLVSDTTSAMLTAPMWLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL
HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83381; Mature: 83381

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCA
CCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCHHHHHHHHHCCCEEE
FGLMSNNAGSYDFSYSTHNGSSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDF
EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECE
HTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHFSRNANFYLGNGSTLNISNTD
EEEEEECCEEECCCCEEEEEEECCCCCCHHHCCCCCCEEEECCCCEEECCCCEEEECCCC
FVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN
EEEEECCCEECCCCEEEEECCEEEEEECCCCCCEEEEECCEEECCCCCEEECCCHHHEEE
YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELG
ECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCEEC
KTQNSSVQIYGGTIKVDGGMNNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLN
CCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCEEEEEEECEEEC
TDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNSTTITLNKNTQAINAFMNTLP
CCCEEECCEEECEECCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC
IQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCEEEEE
VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAA
EECCCCEEEEECCCCCHHCEEEECCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHH
YGNTNATHTLTHLQTHFDTNSFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSA
CCCCCCEEEEEEEEEECCCCCEEEEEEHHCCCCEEEEEEEEHHCCCCCCCCEEEEECCCH
FQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQSAFKENLVSDTTSAMLTAPM
HEEECHHHHCCCHHHHHHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHCCCHHHHEEHHH
WLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL
HHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEE
HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF
EECCCCCCCHHCCCEEEEEECCCEEEEEECCCEEEEEEEC
>Mature Secondary Structure
MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCA
CCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCHHHHHHHHHCCCEEE
FGLMSNNAGSYDFSYSTHNGSSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDF
EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECE
HTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHFSRNANFYLGNGSTLNISNTD
EEEEEECCEEECCCCEEEEEEECCCCCCHHHCCCCCCEEEECCCCEEECCCCEEEECCCC
FVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN
EEEEECCCEECCCCEEEEECCEEEEEECCCCCCEEEEECCEEECCCCCEEECCCHHHEEE
YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELG
ECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCEEC
KTQNSSVQIYGGTIKVDGGMNNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLN
CCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCEEEEEEECEEEC
TDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNSTTITLNKNTQAINAFMNTLP
CCCEEECCEEECEECCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC
IQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCEEEEE
VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAA
EECCCCEEEEECCCCCHHCEEEECCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHH
YGNTNATHTLTHLQTHFDTNSFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSA
CCCCCCEEEEEEEEEECCCCCEEEEEEHHCCCCEEEEEEEEHHCCCCCCCCEEEEECCCH
FQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQSAFKENLVSDTTSAMLTAPM
HEEECHHHHCCCHHHHHHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHCCCHHHHEEHHH
WLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL
HHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEE
HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF
EECCCCCCCHHCCCEEEEEECCCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA