| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32265500
Identifier: 32265500
GI number: 32265500
Start: 141
End: 2423
Strand: Direct
Name: 32265500
Synonym: HH0001
Alternate gene names: NA
Gene position: 141-2423 (Clockwise)
Preceding gene: NA
Following gene: 32265501
Centisome position: 0.01
GC content: 36.09
Gene sequence:
>2283_bases ATGCAAAACACAAACATAGTGCAATATAAAACTTTTTTCATTGTGTTTTTACTTTCTATGGCTTTTTTCTCGCTCAAAGC ACAAAACTATACTAGAAATCTTCCAAGCTCCATTATCTTGCAAAATGGAGAGAGTAGAAGCGATATTCTTACTTCAGTAT GTGGGAATCAATATTGCGCATTTGGCTTAATGAGCAATAATGCTGGAAGCTATGACTTCAGCTATTCTACCCATAATGGT TCTTCGAAGCTTTCTCTCGTTGCAAATACTCCTACAAATCCTTATAACCATAGGCATTCTGTATTTTATATGAGACATCT TAATGTAGGAGAAAATTCAACATTAAGTATAAATGATTTTCATACATTTGCCCTCTCTGGTGGGCTTACACTTAATAATA ATGCTGCTCTTGAGATTATTTTGCAAAAAGGAGAAAAAATACCTGCGAGTGAATTTGCCCCTTCATCAAAAGTGCATTTT TCACGCAATGCAAATTTTTATCTTGGCAATGGCTCAACACTTAATATAAGCAATACTGATTTTGTCATAATAAGCTCTAA AGGCATTATAAATAATAATGCACAAATGATTTTAGATTCTAGCACAATAAGATTCCAAAATACTCTCCACAATAAGGGCA CAATAGAACTTACAGGAGATGTATATAACATAGGACAAAGCCAAACAATCACAAATCTTGGCACTTCGCATTTTATTAAT TATGGCAATGTCAAAGTGAATGGGAATTTTTATAATGGTGGCACTCCGCGTGCTGATTCAGTGCAAGGAAGCTGGTGGCA AAATGATGCACCAAGCCCGGGTGGAGGGAATCTTATAAACTATGGTGGAACAATTCATATTACGGGTAACCTTATTAATG CGCAAGGCGTTGAACTTGGAAAAACACAAAATTCAAGTGTGCAAATTTATGGTGGCACAATCAAAGTTGATGGAGGAATG AACAACGGAGCTAATAATACACTTATTTTAGGTTGGTATAATGGGAAAATGGGGCAGATTGATGGAAATGTAACCAATCG TGGTATAGCTAAAGTTGATATTACAGGAGCAACGCTTAATACAGATCATAGAATCGCTGGTGGTTGGCATACTGGCAGGC TTAATGCAAATCGAGATGTCTTACTAAATGGGAGCAAAAGTGAATTTTTAAACGCGAGAATTAGTCATTACCAAAATAGC ACAACAATCACACTTAATAAAAACACTCAAGCCATTAACGCTTTTATGAACACTCTTCCTATACAATCAAAAACTATTCT TACCGCGCTTGAAAATAGTCTTTACAATCCTAATACAATAGGACAACAAAGTATTTATGCTTATGGCAATAAAAATTACC TTACAAAACTAGGAAATAATATTAATGAAAGCGCAGAATCTATGCTCCTTTATGCCTCTCCTTTAAATATATGGGCTATA GTTCAAAATAGTATTATGCCGCTTAAAGCTCAAGTAACGCCCCCTCCGCGCAAATCTGTTTTAAACATAGCTCCTTTAAG CTCTATTGCTTCACGTGGCTCACTTAAATCCCCTCTTAATGGTGTAAATATTAGTGCCCAAATTCCTTATAAGACACATT TTCTTAGCGCTTTTGCTGCTTATGGAAATACAAACGCTACCCATACACTTACCCACTTGCAAACTCATTTTGACACAAAC TCTTTTCTTGTAGGTTTATATGATAGAATCTCCCTACCATATATAGAAGTTTCACTCCTTGCATACTATGGTGCTAGTTT TAACAAAGCTAAACGACATCTTTTATTAAACAACAGTGCTTTTCAAACACGCTATTCTTATCACGAGCTTGGTTTATCAG CCCAAATCGCTCATCTATTGCGCTTTGAAAAACTATGGATAAAGCCATTTATAGGGATTAACTATGCTTTTGGCTTACAA AGTGCCTTCAAAGAAAATCTTGTTTCAGATACCACCTCCGCTATGCTTACAGCTCCTATGTGGCTTTCTCATTTGCCACA ACTCTCACTTGGCACACAAGGGCAATACTACTTAAAAAAGCAACACTTTCTCTTTGGAGGAGCGCAGATTCAATATGCAC TCACAAATTCCTCTTTTTCCGCTCATTTTGGCTCTTCAGTTCTTAACTTTAACCCTCAAAATTCACTTGGGCTTACACTT CATTTTGGTGGCTCTATGCCTATAGCTAAAGAATTCTCTCTTAGTGCTTATACATTTTATTCACGCTCACACTTGGCATT TCAAAGTTATTCAGGCACAATCAATCTCTCATATTATTTCTAG
Upstream 100 bases:
>100_bases TCTACATAACATAGTTAAAAAATTAAGTTTACTTGCATTATACTTTTAAGTTAAATATAAATCGTTCAATTAAATATAAA TAAGTGACGGAAGGGGGATT
Downstream 100 bases:
>100_bases GTGATTACCTCAAATATGTTACAATCGCTTCTTTCACAATACAGCAAAGGATAATAATATATGGTAGAAGTTTTAGCCAA AATCACAACTCAACGCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCAFGLMSNNAGSYDFSYSTHNG SSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDFHTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHF SRNANFYLGNGSTLNISNTDFVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELGKTQNSSVQIYGGTIKVDGGM NNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLNTDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNS TTITLNKNTQAINAFMNTLPIQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAAYGNTNATHTLTHLQTHFDTN SFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSAFQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQ SAFKENLVSDTTSAMLTAPMWLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF
Sequences:
>Translated_760_residues MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCAFGLMSNNAGSYDFSYSTHNG SSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDFHTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHF SRNANFYLGNGSTLNISNTDFVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELGKTQNSSVQIYGGTIKVDGGM NNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLNTDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNS TTITLNKNTQAINAFMNTLPIQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAAYGNTNATHTLTHLQTHFDTN SFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSAFQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQ SAFKENLVSDTTSAMLTAPMWLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF >Mature_760_residues MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCAFGLMSNNAGSYDFSYSTHNG SSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDFHTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHF SRNANFYLGNGSTLNISNTDFVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELGKTQNSSVQIYGGTIKVDGGM NNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLNTDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNS TTITLNKNTQAINAFMNTLPIQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAAYGNTNATHTLTHLQTHFDTN SFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSAFQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQ SAFKENLVSDTTSAMLTAPMWLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83381; Mature: 83381
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCA CCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCHHHHHHHHHCCCEEE FGLMSNNAGSYDFSYSTHNGSSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDF EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECE HTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHFSRNANFYLGNGSTLNISNTD EEEEEECCEEECCCCEEEEEEECCCCCCHHHCCCCCCEEEECCCCEEECCCCEEEECCCC FVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN EEEEECCCEECCCCEEEEECCEEEEEECCCCCCEEEEECCEEECCCCCEEECCCHHHEEE YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELG ECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCEEC KTQNSSVQIYGGTIKVDGGMNNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLN CCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCEEEEEEECEEEC TDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNSTTITLNKNTQAINAFMNTLP CCCEEECCEEECEECCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC IQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCEEEEE VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAA EECCCCEEEEECCCCCHHCEEEECCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHH YGNTNATHTLTHLQTHFDTNSFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSA CCCCCCEEEEEEEEEECCCCCEEEEEEHHCCCCEEEEEEEEHHCCCCCCCCEEEEECCCH FQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQSAFKENLVSDTTSAMLTAPM HEEECHHHHCCCHHHHHHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHCCCHHHHEEHHH WLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL HHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEE HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF EECCCCCCCHHCCCEEEEEECCCEEEEEECCCEEEEEEEC >Mature Secondary Structure MQNTNIVQYKTFFIVFLLSMAFFSLKAQNYTRNLPSSIILQNGESRSDILTSVCGNQYCA CCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCHHHHHHHHHCCCEEE FGLMSNNAGSYDFSYSTHNGSSKLSLVANTPTNPYNHRHSVFYMRHLNVGENSTLSINDF EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECE HTFALSGGLTLNNNAALEIILQKGEKIPASEFAPSSKVHFSRNANFYLGNGSTLNISNTD EEEEEECCEEECCCCEEEEEEECCCCCCHHHCCCCCCEEEECCCCEEECCCCEEEECCCC FVIISSKGIINNNAQMILDSSTIRFQNTLHNKGTIELTGDVYNIGQSQTITNLGTSHFIN EEEEECCCEECCCCEEEEECCEEEEEECCCCCCEEEEECCEEECCCCCEEECCCHHHEEE YGNVKVNGNFYNGGTPRADSVQGSWWQNDAPSPGGGNLINYGGTIHITGNLINAQGVELG ECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCEEC KTQNSSVQIYGGTIKVDGGMNNGANNTLILGWYNGKMGQIDGNVTNRGIAKVDITGATLN CCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCEEEEEEECEEEC TDHRIAGGWHTGRLNANRDVLLNGSKSEFLNARISHYQNSTTITLNKNTQAINAFMNTLP CCCEEECCEEECEECCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC IQSKTILTALENSLYNPNTIGQQSIYAYGNKNYLTKLGNNINESAESMLLYASPLNIWAI CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCEEEEE VQNSIMPLKAQVTPPPRKSVLNIAPLSSIASRGSLKSPLNGVNISAQIPYKTHFLSAFAA EECCCCEEEEECCCCCHHCEEEECCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHH YGNTNATHTLTHLQTHFDTNSFLVGLYDRISLPYIEVSLLAYYGASFNKAKRHLLLNNSA CCCCCCEEEEEEEEEECCCCCEEEEEEHHCCCCEEEEEEEEHHCCCCCCCCEEEEECCCH FQTRYSYHELGLSAQIAHLLRFEKLWIKPFIGINYAFGLQSAFKENLVSDTTSAMLTAPM HEEECHHHHCCCHHHHHHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHCCCHHHHEEHHH WLSHLPQLSLGTQGQYYLKKQHFLFGGAQIQYALTNSSFSAHFGSSVLNFNPQNSLGLTL HHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEE HFGGSMPIAKEFSLSAYTFYSRSHLAFQSYSGTINLSYYF EECCCCCCCHHCCCEEEEEECCCEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA