| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is cmk [H]
Identifier: 30995433
GI number: 30995433
Start: 1289456
End: 1290157
Strand: Direct
Name: cmk [H]
Synonym: HI1219
Alternate gene names: 30995433
Gene position: 1289456-1290157 (Clockwise)
Preceding gene: 16273135
Following gene: 16273139
Centisome position: 70.46
GC content: 39.09
Gene sequence:
>702_bases ATGGGAATGATTATTACTGTTGATGGCCCTAGTGGTGCTGGGAAAGGAACGCTTTGTTATGCGTTGGCTGAAAAGTTGGG CTATGCATTGTTGGATAGTGGGGCGATTTATCGCGTTACTGCATTGGCAGCGTTGCAACGTAAAACTGATCTAACAAATG AAACAGATTTAGCAGAATTAGCTCGTCATTTAGATATTCAATTTATTCCTCAAAATGGCGAGGTAAGCATTTTGCTTGCA GGAATGGATGTGAGCCGTTTAATTCGCACGCAAGAAGTGGCAGATGCTGCGTCAAAAGTAGCAGTCTTTCAAAAAGTGCG GTCAGCTTTATTACAACTTCAGCAAGATTTTGCAAAAAATGATGGATTAATTGCGGATGGCAGAGATATGGGGACTGTGG TATTCCCAAATGCACAAGTAAAATTATTTTTAGATGCAAGTGCTGAAGAACGTGCAAAAAGACGCTATAAACAGTTGCAA AATAAAGGAATAAATGGTAACTTTGCACAGATTTTAGCCGAGATAAAAGAGCGTGATTTTCGTGATAGAAATCGTGAAGT TGCGCCGCTAAAACCAGCAGATGATGCTTTATTATTGGATAGTACAACCTTGAGTATCGATGAAGTTATTGATCAGGCGT TAGCTTATATTCAAAGANAAGGTATCAGTTTCCGATTTAACTGTTTGTTCAAGGAAGAATAA
Upstream 100 bases:
>100_bases AGAATATGATAAAGATTSSTTTAATGCCATATTAACATTAGCAGGATTACCAAATTCTCACTATAATGCGCAAAATTTGG AGAATGAAAGGATAATTTGT
Downstream 100 bases:
>100_bases GCATTTATCCTCANACCCCGCATTTTATGGATTTTAATGTGGATGTTATTAACTTAAATTAAGAAGATTATTTATATGTC AGAATCTTTTGCTCAACTTT
Product: cytidylate kinase
Products: NA
Alternate protein names: CK 1; Cytidine monophosphate kinase 1; CMP kinase 1 [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MGMIITVDGPSGAGKGTLCYALAEKLGYALLDSGAIYRVTALAALQRKTDLTNETDLAELARHLDIQFIPQNGEVSILLA GMDVSRLIRTQEVADAASKVAVFQKVRSALLQLQQDFAKNDGLIADGRDMGTVVFPNAQVKLFLDASAEERAKRRYKQLQ NKGINGNFAQILAEIKERDFRDRNREVAPLKPADDALLLDSTTLSIDEVIDQALAYIQRXGISFRFNCLFKEE
Sequences:
>Translated_233_residues MGMIITVDGPSGAGKGTLCYALAEKLGYALLDSGAIYRVTALAALQRKTDLTNETDLAELARHLDIQFIPQNGEVSILLA GMDVSRLIRTQEVADAASKVAVFQKVRSALLQLQQDFAKNDGLIADGRDMGTVVFPNAQVKLFLDASAEERAKRRYKQLQ NKGINGNFAQILAEIKERDFRDRNREVAPLKPADDALLLDSTTLSIDEVIDQALAYIQRXGISFRFNCLFKEE >Mature_232_residues GMIITVDGPSGAGKGTLCYALAEKLGYALLDSGAIYRVTALAALQRKTDLTNETDLAELARHLDIQFIPQNGEVSILLAG MDVSRLIRTQEVADAASKVAVFQKVRSALLQLQQDFAKNDGLIADGRDMGTVVFPNAQVKLFLDASAEERAKRRYKQLQN KGINGNFAQILAEIKERDFRDRNREVAPLKPADDALLLDSTTLSIDEVIDQALAYIQRXGISFRFNCLFKEE
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=213, Percent_Identity=65.7276995305164, Blast_Score=278, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 25635; Mature: 25503
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMIITVDGPSGAGKGTLCYALAEKLGYALLDSGAIYRVTALAALQRKTDLTNETDLAEL CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH ARHLDIQFIPQNGEVSILLAGMDVSRLIRTQEVADAASKVAVFQKVRSALLQLQQDFAKN HHHCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGLIADGRDMGTVVFPNAQVKLFLDASAEERAKRRYKQLQNKGINGNFAQILAEIKERDF CCEEECCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RDRNREVAPLKPADDALLLDSTTLSIDEVIDQALAYIQRXGISFRFNCLFKEE HHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure GMIITVDGPSGAGKGTLCYALAEKLGYALLDSGAIYRVTALAALQRKTDLTNETDLAEL CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH ARHLDIQFIPQNGEVSILLAGMDVSRLIRTQEVADAASKVAVFQKVRSALLQLQQDFAKN HHHCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGLIADGRDMGTVVFPNAQVKLFLDASAEERAKRRYKQLQNKGINGNFAQILAEIKERDF CCEEECCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RDRNREVAPLKPADDALLLDSTTLSIDEVIDQALAYIQRXGISFRFNCLFKEE HHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]