| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535283
Identifier: 308535283
GI number: 308535283
Start: 2349455
End: 2350420
Strand: Direct
Name: 308535283
Synonym: NA
Alternate gene names: NA
Gene position: 2349455-2350420 (Clockwise)
Preceding gene: 197118423
Following gene: 197118425
Centisome position: 50.91
GC content: 60.04
Gene sequence:
>966_bases TTGCAAGCCAAAACCATCATCGTTGCGTCCCTTCTTGCCTTAACCATCACATCCCCATTCTCTTATGCTCAGGATGCCGC AACCACGGCTGCACCTGCTGCGGCTCCTATTGCGGCTGCCGCTACGGCCCTGCCGGCTGCCGCTGGAACTGCAGCTGCCG TCCCGGCGGAGCAGGTGATAGCGTCGCTCACCAAGGAGAACGCGCTCCTGCAGGAAAGGCTGAAGGCCTTGGAGAGCTGC AGCATTACCTCGGCCGAGTTGGCGGCGAGAAACAGCAAGCGCCTCAAGGAAATGGCCGGCGACGTCCGCGCCCAGCGGCA GGGGCTGGCCGACTTCGAGGGATACGTAAAGTGGATGTCGGGGCACGTTGCCGGGTACTCCAAGTATCTGGCCGCGGGCT CGGTCGCCGCGCGCTTTGCCAAGGTGCTTCCCATCCCCTACGCCGGTCAGGCCTCGATGTTCACCAAGTTCGTTTCCGAC GCCGCCGTTTCTCTTGGGGCTTCTTCGGTTTCCATCAACAAGTATCTGGCCACCTCTCAGCAGTTCGTCACCCGGGTCGA TGCCCTCGACCCTGCGCGTCCTACCCACACCCAGGAGGTCTCCGACCTCACCCGGTTCGCCGACCAGGACCTCTTGAAGG GGATGCTGGAGGTGCAGGACCGTCTGGTGACTACTTCGCAGCTCACCACCTCATCCCTTTCCTTTCTGGAGAGCCTCAAC CACTACGTCGGCTCAACCGACGAGTATTGGGCGAAGACCAAGTCGCTGCTGAAATCCGACGACAAGGCGGAAAAGAGTTT CCTCTCGGAAAGCACTACCGCTTTGCGTAACAAGGCGCAGGCTTTCAACGCAAAGTTCATCCTTTTCGACGCGACCGTTA AGAAGGCTGCGCCGCAGATAAAATCGCTGGTTGCCTACGACGACTTGATCCGTTCCATGGATCCGAGGTTCGCCAAATTG AGGTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
NA
Sequences:
>Translated_321_residues MQAKTIIVASLLALTITSPFSYAQDAATTAAPAAAPIAAAATALPAAAGTAAAVPAEQVIASLTKENALLQERLKALESC SITSAELAARNSKRLKEMAGDVRAQRQGLADFEGYVKWMSGHVAGYSKYLAAGSVAARFAKVLPIPYAGQASMFTKFVSD AAVSLGASSVSINKYLATSQQFVTRVDALDPARPTHTQEVSDLTRFADQDLLKGMLEVQDRLVTTSQLTTSSLSFLESLN HYVGSTDEYWAKTKSLLKSDDKAEKSFLSESTTALRNKAQAFNAKFILFDATVKKAAPQIKSLVAYDDLIRSMDPRFAKL R >Mature_321_residues MQAKTIIVASLLALTITSPFSYAQDAATTAAPAAAPIAAAATALPAAAGTAAAVPAEQVIASLTKENALLQERLKALESC SITSAELAARNSKRLKEMAGDVRAQRQGLADFEGYVKWMSGHVAGYSKYLAAGSVAARFAKVLPIPYAGQASMFTKFVSD AAVSLGASSVSINKYLATSQQFVTRVDALDPARPTHTQEVSDLTRFADQDLLKGMLEVQDRLVTTSQLTTSSLSFLESLN HYVGSTDEYWAKTKSLLKSDDKAEKSFLSESTTALRNKAQAFNAKFILFDATVKKAAPQIKSLVAYDDLIRSMDPRFAKL R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34329; Mature: 34329
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAKTIIVASLLALTITSPFSYAQDAATTAAPAAAPIAAAATALPAAAGTAAAVPAEQVI CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHH ASLTKENALLQERLKALESCSITSAELAARNSKRLKEMAGDVRAQRQGLADFEGYVKWMS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GHVAGYSKYLAAGSVAARFAKVLPIPYAGQASMFTKFVSDAAVSLGASSVSINKYLATSQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QFVTRVDALDPARPTHTQEVSDLTRFADQDLLKGMLEVQDRLVTTSQLTTSSLSFLESLN HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYVGSTDEYWAKTKSLLKSDDKAEKSFLSESTTALRNKAQAFNAKFILFDATVKKAAPQI HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHH KSLVAYDDLIRSMDPRFAKLR HHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MQAKTIIVASLLALTITSPFSYAQDAATTAAPAAAPIAAAATALPAAAGTAAAVPAEQVI CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHH ASLTKENALLQERLKALESCSITSAELAARNSKRLKEMAGDVRAQRQGLADFEGYVKWMS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GHVAGYSKYLAAGSVAARFAKVLPIPYAGQASMFTKFVSDAAVSLGASSVSINKYLATSQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QFVTRVDALDPARPTHTQEVSDLTRFADQDLLKGMLEVQDRLVTTSQLTTSSLSFLESLN HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYVGSTDEYWAKTKSLLKSDDKAEKSFLSESTTALRNKAQAFNAKFILFDATVKKAAPQI HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHH KSLVAYDDLIRSMDPRFAKLR HHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA