| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is mnhD [H]
Identifier: 308535258
GI number: 308535258
Start: 1937539
End: 1939347
Strand: Reverse
Name: mnhD [H]
Synonym: NA
Alternate gene names: 308535258
Gene position: 1939347-1937539 (Counterclockwise)
Preceding gene: 197118061
Following gene: 197118059
Centisome position: 42.02
GC content: 64.84
Gene sequence:
>1809_bases GTGGAACTCGCCCCCTTTCCCGTTCTGGCTCCGCTTTTTTTGGCGGCGGTTTTGGCGGCGCTGGAGCATGCGACCAACCG GCACCGGATCCTCGACCTCCTCTCTTTGGCCACCGTCGCGGCCGTGCTGGTCCTGGACCTGCTCCTTTTGAAACGCTCCC TCTCCGGCACCGTAGTCTACTGGTTCGGCGCCTGGACTCCGATGCAAGGCTTTCCCGTAGGGATCGCCTTCGTCGTGGAT CCGGTCGCCGCCCTCCTCGCCCTTTTCGCGGCTTTTCTCACCGCCATGGGATTTCTCTATTCCTGGCACCGTTTCAAGGC GATCGGCACCTACTATCACACGCTCATGCTCCTTTTCCTCGCCTCCATGCAGGGCTTCTGCCTCACCGGCGACCTCTTCA ACATGTTCGTCTTCTTCGAGATGATGGGGGTCACCGCCTATGCGCTCACCGGGTACAAGATCGAGGACAGCGGCCCCTTG GAAGGAGCGCTCAACTTCGCCGTGATGAACAGCATCGGCGGCTTGATGGTCCTCTTCGGGATCGGCCTCCTTTACGGCAT CACCGGCGGGCTCAACCTCGCCTGGGCCGGCGCGTTCCTTGAGGGAAAAGCGGGAGGGGCAACTGTCGCTGCGGCCTTCC TACTCTTAAGCCTGGGGTTCCTGGTGAAGGGGGCCATCGTCCCCTTTCATTTCTGGCTTCCCGACGCCCATGCCGTCGCC CCTACCCCCGCCTCCGTCCTTTTCTCCGGCATCATGGTGCAGCTGGGGCTCTACGCGGTGGCGCGCATCTACTGGGTCGT CTTCAGCGACGCGCTCGACCCCGCCCCCTTGCGGCTCCTGTTGCTGTCTGCTGGTGCCGCTACGGCCGTTTTGGGAGCCG TCATGGCACTCCTGCAACGGCACCTGAAACGGATGCTCGCCTTCTCCACGGTAAGCCACAGCGGGATGATGCTGACCGGG ATCGCCCTCATGGACCCGTCCGCCCTCGCCGGGACCCTCCTCTACCTGGTCGGGCACGGGGCGGTCAAGGGGGCCCTCTT CGTCTGCACCGGGATCATCCTCTATCACTACAATTCGGTGGACGAGGAGACCCTGCGCGGCAAGTGCCTCCCCCTGAAGG CGACCGGCGCCCTCTTCTGCCTTTGCGGCGTAGCTCTCGCCGGGCTCCCCCCCTTCGGGACCTGGGCCGGAAAGGGAGTG CTGGAGCAGAGCGCCGAGAGCCTCGGCTACGGGTGGCTCCCCCCCCTGTTCCTGATCTGCTCAGCCATCACGGGCGGGGT GGTGCTGCGCGCCGGGGGAAGCCTTTTCTACGGCGTAGGCTCTGCCAACTTCCTCTCCAGTTCGGCCCCGTCCTCGGGTA AAAAGGAGGAACCGGAGGCTTTCGAGGAGAAAGGGGCGACACCGAGGATGATGCTCCTTCCCCTGGTCCTATTGATTGTG GTCGCAGTCGGGGCCGGGGCCTTGCCGCAGGTGCAGAGTTCCCTTGCAGAAGGAGCAGCGAGGCTCGCGGATGGGAAAGG GTACCGGGCTACGGTGCTAAAGGGCGGGGCTTACGCTGCGGCAGCGCTGCCGCAACCCGACCGACCGGATTTGGCAATGG GAGTGGCTGCGGCCCTCGCGGCGCTAGCCGTGGCGGGAATTTTTCTGGCCCCGCCGGACGCGGTGCGGCCGCTGAGGGGC CTGCGGCGCGCGCTCGAAGGACCGGTAGCGCTCTTAAGATCCCTGCACAGCGGCTACATCGGGGACTACACCGCCTGGTT TCTGGCAGGGGCCGCAGTCATGACGCTTTTCGCCATATTGTCGCAATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: monovalent cation/proton antiporter subunit MnhD
Products: H2; oxidized ferredoxin [C]
Alternate protein names: Mrp complex subunit D; Multiple resistance and pH homeostasis protein D [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
NA
Sequences:
>Translated_602_residues MELAPFPVLAPLFLAAVLAALEHATNRHRILDLLSLATVAAVLVLDLLLLKRSLSGTVVYWFGAWTPMQGFPVGIAFVVD PVAALLALFAAFLTAMGFLYSWHRFKAIGTYYHTLMLLFLASMQGFCLTGDLFNMFVFFEMMGVTAYALTGYKIEDSGPL EGALNFAVMNSIGGLMVLFGIGLLYGITGGLNLAWAGAFLEGKAGGATVAAAFLLLSLGFLVKGAIVPFHFWLPDAHAVA PTPASVLFSGIMVQLGLYAVARIYWVVFSDALDPAPLRLLLLSAGAATAVLGAVMALLQRHLKRMLAFSTVSHSGMMLTG IALMDPSALAGTLLYLVGHGAVKGALFVCTGIILYHYNSVDEETLRGKCLPLKATGALFCLCGVALAGLPPFGTWAGKGV LEQSAESLGYGWLPPLFLICSAITGGVVLRAGGSLFYGVGSANFLSSSAPSSGKKEEPEAFEEKGATPRMMLLPLVLLIV VAVGAGALPQVQSSLAEGAARLADGKGYRATVLKGGAYAAAALPQPDRPDLAMGVAAALAALAVAGIFLAPPDAVRPLRG LRRALEGPVALLRSLHSGYIGDYTAWFLAGAAVMTLFAILSQ >Mature_602_residues MELAPFPVLAPLFLAAVLAALEHATNRHRILDLLSLATVAAVLVLDLLLLKRSLSGTVVYWFGAWTPMQGFPVGIAFVVD PVAALLALFAAFLTAMGFLYSWHRFKAIGTYYHTLMLLFLASMQGFCLTGDLFNMFVFFEMMGVTAYALTGYKIEDSGPL EGALNFAVMNSIGGLMVLFGIGLLYGITGGLNLAWAGAFLEGKAGGATVAAAFLLLSLGFLVKGAIVPFHFWLPDAHAVA PTPASVLFSGIMVQLGLYAVARIYWVVFSDALDPAPLRLLLLSAGAATAVLGAVMALLQRHLKRMLAFSTVSHSGMMLTG IALMDPSALAGTLLYLVGHGAVKGALFVCTGIILYHYNSVDEETLRGKCLPLKATGALFCLCGVALAGLPPFGTWAGKGV LEQSAESLGYGWLPPLFLICSAITGGVVLRAGGSLFYGVGSANFLSSSAPSSGKKEEPEAFEEKGATPRMMLLPLVLLIV VAVGAGALPQVQSSLAEGAARLADGKGYRATVLKGGAYAAAALPQPDRPDLAMGVAAALAALAVAGIFLAPPDAVRPLRG LRRALEGPVALLRSLHSGYIGDYTAWFLAGAAVMTLFAILSQ
Specific function: Mrp complex is a Na(+)/H(+) antiporter that is considered to be the major Na(+) excretion system in B.subtilis. Has a major role in Na(+) resistance and a minor role in Na(+)- and K(+)-dependent pH homeostasis as compared to TetB. MrpA may be the actual N
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit D family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=387, Percent_Identity=27.1317829457364, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI251831116, Length=221, Percent_Identity=23.0769230769231, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1788827, Length=388, Percent_Identity=28.0927835051546, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI1788613, Length=342, Percent_Identity=28.6549707602339, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1788831, Length=289, Percent_Identity=29.4117647058824, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1788829, Length=336, Percent_Identity=30.3571428571429, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI145693160, Length=384, Percent_Identity=23.6979166666667, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1788614, Length=456, Percent_Identity=26.9736842105263, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI2367154, Length=407, Percent_Identity=29.4840294840295, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004775 - InterPro: IPR001750 - InterPro: IPR003918 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 62876; Mature: 62876
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELAPFPVLAPLFLAAVLAALEHATNRHRILDLLSLATVAAVLVLDLLLLKRSLSGTVVY CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE WFGAWTPMQGFPVGIAFVVDPVAALLALFAAFLTAMGFLYSWHRFKAIGTYYHTLMLLFL EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASMQGFCLTGDLFNMFVFFEMMGVTAYALTGYKIEDSGPLEGALNFAVMNSIGGLMVLFG HHCCCCEEEHHHHHHHHHHHHHHHHHHHEECEEECCCCCCHHHHHHHHHHHHHHHHHHHH IGLLYGITGGLNLAWAGAFLEGKAGGATVAAAFLLLSLGFLVKGAIVPFHFWLPDAHAVA HHHHHHHCCCCCHHEECHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCC PTPASVLFSGIMVQLGLYAVARIYWVVFSDALDPAPLRLLLLSAGAATAVLGAVMALLQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH HLKRMLAFSTVSHSGMMLTGIALMDPSALAGTLLYLVGHGAVKGALFVCTGIILYHYNSV HHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC DEETLRGKCLPLKATGALFCLCGVALAGLPPFGTWAGKGVLEQSAESLGYGWLPPLFLIC CHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH SAITGGVVLRAGGSLFYGVGSANFLSSSAPSSGKKEEPEAFEEKGATPRMMLLPLVLLIV HHHHCCEEEEECCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH VAVGAGALPQVQSSLAEGAARLADGKGYRATVLKGGAYAAAALPQPDRPDLAMGVAAALA HHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHH ALAVAGIFLAPPDAVRPLRGLRRALEGPVALLRSLHSGYIGDYTAWFLAGAAVMTLFAIL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SQ CC >Mature Secondary Structure MELAPFPVLAPLFLAAVLAALEHATNRHRILDLLSLATVAAVLVLDLLLLKRSLSGTVVY CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE WFGAWTPMQGFPVGIAFVVDPVAALLALFAAFLTAMGFLYSWHRFKAIGTYYHTLMLLFL EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASMQGFCLTGDLFNMFVFFEMMGVTAYALTGYKIEDSGPLEGALNFAVMNSIGGLMVLFG HHCCCCEEEHHHHHHHHHHHHHHHHHHHEECEEECCCCCCHHHHHHHHHHHHHHHHHHHH IGLLYGITGGLNLAWAGAFLEGKAGGATVAAAFLLLSLGFLVKGAIVPFHFWLPDAHAVA HHHHHHHCCCCCHHEECHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCC PTPASVLFSGIMVQLGLYAVARIYWVVFSDALDPAPLRLLLLSAGAATAVLGAVMALLQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH HLKRMLAFSTVSHSGMMLTGIALMDPSALAGTLLYLVGHGAVKGALFVCTGIILYHYNSV HHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC DEETLRGKCLPLKATGALFCLCGVALAGLPPFGTWAGKGVLEQSAESLGYGWLPPLFLIC CHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH SAITGGVVLRAGGSLFYGVGSANFLSSSAPSSGKKEEPEAFEEKGATPRMMLLPLVLLIV HHHHCCEEEEECCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH VAVGAGALPQVQSSLAEGAARLADGKGYRATVLKGGAYAAAALPQPDRPDLAMGVAAALA HHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHH ALAVAGIFLAPPDAVRPLRGLRRALEGPVALLRSLHSGYIGDYTAWFLAGAAVMTLFAIL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton; reduced ferredoxin [C]
Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 10568751; 10198001; 11356194 [H]