| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pilW-3
Identifier: 308535247
GI number: 308535247
Start: 1787215
End: 1788393
Strand: Direct
Name: pilW-3
Synonym: NA
Alternate gene names: NA
Gene position: 1787215-1788393 (Clockwise)
Preceding gene: 197117925
Following gene: 197117927
Centisome position: 38.72
GC content: 60.56
Gene sequence:
>1179_bases ATGCTGAGGAACAGCCGTGGTTATTCGCTGGTCGAACTGATCGTGGTGATGGCGATCTTCGTTGCCGTGTTGGTGGTCAC TTCGAACGGATTCAAGACGGTGCTGACCCAGATGGGGTCGCAGTCCAAGCTCCTGGAGACGGATATCGGCAACGTGGTCG GGCTCGAGGTGCTCCGTTCCGATTTGCAGAGCGCAGGCTACGGGCTCCCCTGGACCTTCCAGAATACGCCCGGCGCCGAT TACACCGAGGTAAATAGCGGCGTCACCACCATGCCGGTCGGGGCGCCTTTCTGGGAGAGCGGGAAAAGCCCGAGCAGCTA CAACGATGCTCCCGACAAGGTGCCGCGCGCCGTGCAGAGCGAGGACACCGCCTTCAACAAGGTGGGAAGCGTGGGCTCCA AATACCTGGTGCTGAAATCGCTGACCCTGCTGCCGGAGGCGACGCCCAAGAAATGGATCACCGTCACCTACAGCAATACA TCAAAGAACGAGTCGAAATGGAACGATCCCATCCGTTCCTTCGCCACCACGGGCTCCCCAGCGGAGCGGGTCATGGTGAT CAGGAATGTCTTTGTTGACGGGATACCGACCAAGCAAATGCAGGTGATGAGCGGCAGCGGCGCCTTCTCCGCCCCATTCA GCACATACACCACCTTGACGCTTCCACATAGCTCGGGTGACGTCTTCGAGGTCTACGGAGTTGCTAAGGCCAGTTCGCTT AGGATGCCCTTCAACCGCGCCGACTACTATGTGCGCACCCCACCCACTCCCCCTCCGGCCTGCGCCCCCAACACCGGGGT GCTGTACAAGGCGTACCTGAACCAGACGAGTGGGTTCACCGAACTGCCGCTTCTCGATTGCGTGGCGGATATGCAGGTGG TCTATGGACTGGGCCCGGTGGGATCGACCGAGGTGAACCTGCACCAGGCGGCCCCACCTGCCACCGCCAAGGACATCCGC GAACAGGTCAAGGAGATACGGCTCTACATCCTGGCGCATACCGGTAGGAAGGACAGCGGCTACACCCATCCAAGCAGGCA GGTCGTGGTGGGAGAGGACTTCGGCGGAGGGGTGGTGGGAAGGAGCTTCGACCTGCAGAACGTGATCGGTACAGGGTGGC AGAACTACCGCTGGAAGCTGTACTCCATAGTCGTGCGACCGCAGAACCTCATACAATAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: type IV pilus assembly protein PilW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
NA
Sequences:
>Translated_392_residues MLRNSRGYSLVELIVVMAIFVAVLVVTSNGFKTVLTQMGSQSKLLETDIGNVVGLEVLRSDLQSAGYGLPWTFQNTPGAD YTEVNSGVTTMPVGAPFWESGKSPSSYNDAPDKVPRAVQSEDTAFNKVGSVGSKYLVLKSLTLLPEATPKKWITVTYSNT SKNESKWNDPIRSFATTGSPAERVMVIRNVFVDGIPTKQMQVMSGSGAFSAPFSTYTTLTLPHSSGDVFEVYGVAKASSL RMPFNRADYYVRTPPTPPPACAPNTGVLYKAYLNQTSGFTELPLLDCVADMQVVYGLGPVGSTEVNLHQAAPPATAKDIR EQVKEIRLYILAHTGRKDSGYTHPSRQVVVGEDFGGGVVGRSFDLQNVIGTGWQNYRWKLYSIVVRPQNLIQ >Mature_392_residues MLRNSRGYSLVELIVVMAIFVAVLVVTSNGFKTVLTQMGSQSKLLETDIGNVVGLEVLRSDLQSAGYGLPWTFQNTPGAD YTEVNSGVTTMPVGAPFWESGKSPSSYNDAPDKVPRAVQSEDTAFNKVGSVGSKYLVLKSLTLLPEATPKKWITVTYSNT SKNESKWNDPIRSFATTGSPAERVMVIRNVFVDGIPTKQMQVMSGSGAFSAPFSTYTTLTLPHSSGDVFEVYGVAKASSL RMPFNRADYYVRTPPTPPPACAPNTGVLYKAYLNQTSGFTELPLLDCVADMQVVYGLGPVGSTEVNLHQAAPPATAKDIR EQVKEIRLYILAHTGRKDSGYTHPSRQVVVGEDFGGGVVGRSFDLQNVIGTGWQNYRWKLYSIVVRPQNLIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42656; Mature: 42656
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNSRGYSLVELIVVMAIFVAVLVVTSNGFKTVLTQMGSQSKLLETDIGNVVGLEVLRS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH DLQSAGYGLPWTFQNTPGADYTEVNSGVTTMPVGAPFWESGKSPSSYNDAPDKVPRAVQS HHHHCCCCCCEEECCCCCCCHHHHCCCCEECCCCCCHHHCCCCCCCCCCCHHHHHHHHCC EDTAFNKVGSVGSKYLVLKSLTLLPEATPKKWITVTYSNTSKNESKWNDPIRSFATTGSP CCHHHHHHHCCCCCEEEEHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCH AERVMVIRNVFVDGIPTKQMQVMSGSGAFSAPFSTYTTLTLPHSSGDVFEVYGVAKASSL HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCC RMPFNRADYYVRTPPTPPPACAPNTGVLYKAYLNQTSGFTELPLLDCVADMQVVYGLGPV CCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC GSTEVNLHQAAPPATAKDIREQVKEIRLYILAHTGRKDSGYTHPSRQVVVGEDFGGGVVG CCCEEEEECCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC RSFDLQNVIGTGWQNYRWKLYSIVVRPQNLIQ CCCCHHHHHHCCCCCCEEEEEEEEECCHHHCC >Mature Secondary Structure MLRNSRGYSLVELIVVMAIFVAVLVVTSNGFKTVLTQMGSQSKLLETDIGNVVGLEVLRS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH DLQSAGYGLPWTFQNTPGADYTEVNSGVTTMPVGAPFWESGKSPSSYNDAPDKVPRAVQS HHHHCCCCCCEEECCCCCCCHHHHCCCCEECCCCCCHHHCCCCCCCCCCCHHHHHHHHCC EDTAFNKVGSVGSKYLVLKSLTLLPEATPKKWITVTYSNTSKNESKWNDPIRSFATTGSP CCHHHHHHHCCCCCEEEEHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCH AERVMVIRNVFVDGIPTKQMQVMSGSGAFSAPFSTYTTLTLPHSSGDVFEVYGVAKASSL HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCC RMPFNRADYYVRTPPTPPPACAPNTGVLYKAYLNQTSGFTELPLLDCVADMQVVYGLGPV CCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC GSTEVNLHQAAPPATAKDIREQVKEIRLYILAHTGRKDSGYTHPSRQVVVGEDFGGGVVG CCCEEEEECCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC RSFDLQNVIGTGWQNYRWKLYSIVVRPQNLIQ CCCCHHHHHHCCCCCCEEEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA