| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pilY1-1
Identifier: 308535233
GI number: 308535233
Start: 1578224
End: 1578793
Strand: Direct
Name: pilY1-1
Synonym: NA
Alternate gene names: NA
Gene position: 1578224-1578793 (Clockwise)
Preceding gene: 197117753
Following gene: 197117759
Centisome position: 34.2
GC content: 60.18
Gene sequence:
>570_bases ATGAAAAAAGGTAGAGTGGTCTGCACCGCGTTGCCCCGTGTCCTGTTTTGGCTCTGCATTCTGAACGTCTGCCTGCTGGC TGTCGCGGGGAGGCTCTTCGCAGCCGATGCATTTCCCGGACTCCCCTACTGCAGCGTCCCCCCGTCGGCAGGAGCCGGGG TAAAGCCCAACCTGCTGCTCATGCTGGACAACTCCGCTAGCCTCTACGACCTGGCCTATACCGATCCCAACGCCTATTGC ATCGACGACACCTACTCCGACTCAAAGTCGTACTCCGGATACTTCGACCAAGGGGTCGTCTACAGCTACGACTTGGCAGC CGGCGGCTTCAAGACCACGAGCGCAAAACTTCCAGGCGGCTGCAACACGGTGGACAAGGGCTATCTCTGCGTCGGGATGG CGGCTGACGTCGATCAATCGAAACCTCGCACGGTGGACCGCTTCCTCGCCAGCGGCAGGTTCCTCAACTGGCTGTCGATG TCGAAACTGGACCTGCAAAAACGGGTGCTGACCGGCGGCAAATACATCGAAAACACCGGCAGGTTACAGGCCGAAAGCCG TGGCTGCCGG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: type IV pilus tip-associated adhesin lipoprotein
Products: NA
Alternate protein names: Type IV Pilus Tip-Associated Adhesin Lipoprotein; Fimbrial Biogenesis
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
NA
Sequences:
>Translated_190_residues MKKGRVVCTALPRVLFWLCILNVCLLAVAGRLFAADAFPGLPYCSVPPSAGAGVKPNLLLMLDNSASLYDLAYTDPNAYC IDDTYSDSKSYSGYFDQGVVYSYDLAAGGFKTTSAKLPGGCNTVDKGYLCVGMAADVDQSKPRTVDRFLASGRFLNWLSM SKLDLQKRVLTGGKYIENTGRLQAESRGCR >Mature_190_residues MKKGRVVCTALPRVLFWLCILNVCLLAVAGRLFAADAFPGLPYCSVPPSAGAGVKPNLLLMLDNSASLYDLAYTDPNAYC IDDTYSDSKSYSGYFDQGVVYSYDLAAGGFKTTSAKLPGGCNTVDKGYLCVGMAADVDQSKPRTVDRFLASGRFLNWLSM SKLDLQKRVLTGGKYIENTGRLQAESRGCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20558; Mature: 20558
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGRVVCTALPRVLFWLCILNVCLLAVAGRLFAADAFPGLPYCSVPPSAGAGVKPNLLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE MLDNSASLYDLAYTDPNAYCIDDTYSDSKSYSGYFDQGVVYSYDLAAGGFKTTSAKLPGG EECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC CNTVDKGYLCVGMAADVDQSKPRTVDRFLASGRFLNWLSMSKLDLQKRVLTGGKYIENTG CCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCEECCCC RLQAESRGCR CEECCCCCCC >Mature Secondary Structure MKKGRVVCTALPRVLFWLCILNVCLLAVAGRLFAADAFPGLPYCSVPPSAGAGVKPNLLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE MLDNSASLYDLAYTDPNAYCIDDTYSDSKSYSGYFDQGVVYSYDLAAGGFKTTSAKLPGG EECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC CNTVDKGYLCVGMAADVDQSKPRTVDRFLASGRFLNWLSMSKLDLQKRVLTGGKYIENTG CCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCEECCCC RLQAESRGCR CEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA