| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535232
Identifier: 308535232
GI number: 308535232
Start: 1569797
End: 1570969
Strand: Reverse
Name: 308535232
Synonym: NA
Alternate gene names: NA
Gene position: 1570969-1569797 (Counterclockwise)
Preceding gene: 197117751
Following gene: 197117749
Centisome position: 34.04
GC content: 66.41
Gene sequence:
>1173_bases GTGTCCGCAGGCATGCTGGAAAACGCCGTGGTCAGGCTGTTACGCGAGCGCCCCTTTTACGGGCACTTCCTCCTGAACCT GCGCCGCGAGGAGCGGCCGCTTCGGGGAAAACCCGCGGGAGTCACCATCCGAAACGGCACCCCTATCCTGGCCGTCGACC CGGCCTCTTTCGGGGCCTTTTCGGCGACCGAGCAACAGGCACTTTTGGAGCACCTGGTAAAGCACCTTTTGCACCTGCAC ATGCTGCGCGGCAAAGGGCGCAACGCGCACGACTGGGACGTCGCCTGCGACCTCGCCATCAATCCGGGGAGTCCAGGGCT TCCCGCCGACGCGCTGTACCCCGCTCAGTACAAGATGCCCGACGGCCTCGCCGCCGAGGAGTACTACCAGCAGTTGGTCC CCCCCTTCGACATCGGCAACCTGGATGGAAGCGGGTTTGGCGACGCGGAAAAGGAACGGGAAGGTGCCGCGGGCGCCGGA AAGGGCGACCCCGCCGCCTCGACCCTCGACGACCACGCCCTCTGGAGCGACGCCGACAGCACGCCGCTTCCCTTGGCGCA GGAGATGCTGGCTACGCTCACCCGAGAAAGCCTGCGCGGCAGCGATGGCGAAGCTCCACCCGAGATCAGGGAGGTAGTTG AAGGGCTTTTGCGTCCCTCCCCCATCCCCTGGCGCCAGGTGCTGCGGCAGTTCGTCGCCACCGCCGGACGGCTGGGGAGG GAGGGGACCTGGATGAGGGAGCATCGCCGCTTCGCGCATGTCACCCCCGGAACCCGTAAGCGCCACCGCCTCAACCTGCT GGTCGGCATCGACGTGAGCGACTCAACCAATTCGGTGGAGCTGCGCGAGGCGTTCGCCAGGGAACTGGTCCAGATTGCGC GGGGCCGCGACGCCTCCATCACCGTCCTTTACGCCAACAGCAAAATACAGGAAGTGGAAGCCTTCAAGGGGAGTGCCTTC GCCCCCGAACGCTACGACGGCGGCGGCTTCACCGATTTAAGGCCGGTGTTCGCCTATGCGAGGGCCATGCATCCCGTTCC CGCAGCGGTGATCTACCTGACCGACGGCATCGGGCCCGTTCCCGAGCAGATGGAACTGCCGACCCTCTGGGTGCTGACCG CCGAGGGGGAGAAGCCGGCGCCCTGGGGCGTCGAACTGAGACTGGAGGTTTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
NA
Sequences:
>Translated_390_residues MSAGMLENAVVRLLRERPFYGHFLLNLRREERPLRGKPAGVTIRNGTPILAVDPASFGAFSATEQQALLEHLVKHLLHLH MLRGKGRNAHDWDVACDLAINPGSPGLPADALYPAQYKMPDGLAAEEYYQQLVPPFDIGNLDGSGFGDAEKEREGAAGAG KGDPAASTLDDHALWSDADSTPLPLAQEMLATLTRESLRGSDGEAPPEIREVVEGLLRPSPIPWRQVLRQFVATAGRLGR EGTWMREHRRFAHVTPGTRKRHRLNLLVGIDVSDSTNSVELREAFARELVQIARGRDASITVLYANSKIQEVEAFKGSAF APERYDGGGFTDLRPVFAYARAMHPVPAAVIYLTDGIGPVPEQMELPTLWVLTAEGEKPAPWGVELRLEV >Mature_389_residues SAGMLENAVVRLLRERPFYGHFLLNLRREERPLRGKPAGVTIRNGTPILAVDPASFGAFSATEQQALLEHLVKHLLHLHM LRGKGRNAHDWDVACDLAINPGSPGLPADALYPAQYKMPDGLAAEEYYQQLVPPFDIGNLDGSGFGDAEKEREGAAGAGK GDPAASTLDDHALWSDADSTPLPLAQEMLATLTRESLRGSDGEAPPEIREVVEGLLRPSPIPWRQVLRQFVATAGRLGRE GTWMREHRRFAHVTPGTRKRHRLNLLVGIDVSDSTNSVELREAFARELVQIARGRDASITVLYANSKIQEVEAFKGSAFA PERYDGGGFTDLRPVFAYARAMHPVPAAVIYLTDGIGPVPEQMELPTLWVLTAEGEKPAPWGVELRLEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 42764; Mature: 42633
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGMLENAVVRLLRERPFYGHFLLNLRREERPLRGKPAGVTIRNGTPILAVDPASFGAF CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCC SATEQQALLEHLVKHLLHLHMLRGKGRNAHDWDVACDLAINPGSPGLPADALYPAQYKMP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC DGLAAEEYYQQLVPPFDIGNLDGSGFGDAEKEREGAAGAGKGDPAASTLDDHALWSDADS CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC TPLPLAQEMLATLTRESLRGSDGEAPPEIREVVEGLLRPSPIPWRQVLRQFVATAGRLGR CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC EGTWMREHRRFAHVTPGTRKRHRLNLLVGIDVSDSTNSVELREAFARELVQIARGRDASI CCCHHHHHCCEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE TVLYANSKIQEVEAFKGSAFAPERYDGGGFTDLRPVFAYARAMHPVPAAVIYLTDGIGPV EEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCC PEQMELPTLWVLTAEGEKPAPWGVELRLEV CCCCCCCEEEEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure SAGMLENAVVRLLRERPFYGHFLLNLRREERPLRGKPAGVTIRNGTPILAVDPASFGAF CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCC SATEQQALLEHLVKHLLHLHMLRGKGRNAHDWDVACDLAINPGSPGLPADALYPAQYKMP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC DGLAAEEYYQQLVPPFDIGNLDGSGFGDAEKEREGAAGAGKGDPAASTLDDHALWSDADS CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC TPLPLAQEMLATLTRESLRGSDGEAPPEIREVVEGLLRPSPIPWRQVLRQFVATAGRLGR CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC EGTWMREHRRFAHVTPGTRKRHRLNLLVGIDVSDSTNSVELREAFARELVQIARGRDASI CCCHHHHHCCEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE TVLYANSKIQEVEAFKGSAFAPERYDGGGFTDLRPVFAYARAMHPVPAAVIYLTDGIGPV EEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCC PEQMELPTLWVLTAEGEKPAPWGVELRLEV CCCCCCCEEEEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]