| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535229
Identifier: 308535229
GI number: 308535229
Start: 1521304
End: 1522179
Strand: Direct
Name: 308535229
Synonym: NA
Alternate gene names: NA
Gene position: 1521304-1522179 (Clockwise)
Preceding gene: 308535228
Following gene: 197117709
Centisome position: 32.96
GC content: 64.38
Gene sequence:
>876_bases ATAAAGCTCACCAAAGGGGGAGGGCTGTACATCGCCGCTACGCTGCTTTTGGGCGTCTCCGCAGTCAATACCGGGAACAA CCTGCTCTTTCTCATCGTGGCCGCCATGCTGGGGTTCATGGCGGTGACCGGTGTCCTTGGTTGGCTGAACCTCCGGGGGC TCTCCGCCCGGGTCCAGCTTCCCGACGAAGTCTACGCCGGCACCACGACGCCTTTGTCTGTGCACCTGGAGAACCGCAAG AAACTCCTTCCCTCCTTTCTCATCGACATCGGGGTCTCGTCCGGCTTCGTCTGGTTTCTCATGCTCCAGCCGCGCCGGCC TGAGTCGGCATCGCTTTTCCTCACCTTTTCCTCCCGCGGCAGCAGCAGCCTCCCCAGCGCGGTGATCAGCTCCCGTTTCC CCGTGAATTTCTTCATCCGCTACAGCCGGATCGACCTTCCCGCGACCTTCATCGTCTTTCCCGCGCCGCGGCCTCTTGGG CTTGCGCTGCAGGGTGGCAAGCCGGATACCGGGGAGGCGGTCGCGGCCGCGGCCCCCGGCTACGAGGGGGACCTCGCCAA GATCTCGGATTACCGGGGAGGGGAGCCGCTCAAGCTGATCCACTGGCGCCTCTCCGCCAAACACGACGTCTTCAAGGTAA AGGAGCTTTCGGCGACGGCGGGGGAGCCGCTTACCCTGGACCTGGAGCGCATCCCCGGCCGCGACCTGGAGCAGCGGCTT TGCGCCTGCTGCTTCCTGGTGAACCGCCTGGTGAAGGGGGGGCGTCAGGTAGGGCTCAGGTTGGGCGAGAAGGTGATCGC CCCAGCGGCGCCTACCCGCGGGCACCGGCTCAAACTTCTGGGAGAACTTGCCCTTTATGGCGAAGCTAAAGATTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
NA
Sequences:
>Translated_291_residues MKLTKGGGLYIAATLLLGVSAVNTGNNLLFLIVAAMLGFMAVTGVLGWLNLRGLSARVQLPDEVYAGTTTPLSVHLENRK KLLPSFLIDIGVSSGFVWFLMLQPRRPESASLFLTFSSRGSSSLPSAVISSRFPVNFFIRYSRIDLPATFIVFPAPRPLG LALQGGKPDTGEAVAAAAPGYEGDLAKISDYRGGEPLKLIHWRLSAKHDVFKVKELSATAGEPLTLDLERIPGRDLEQRL CACCFLVNRLVKGGRQVGLRLGEKVIAPAAPTRGHRLKLLGELALYGEAKD >Mature_291_residues MKLTKGGGLYIAATLLLGVSAVNTGNNLLFLIVAAMLGFMAVTGVLGWLNLRGLSARVQLPDEVYAGTTTPLSVHLENRK KLLPSFLIDIGVSSGFVWFLMLQPRRPESASLFLTFSSRGSSSLPSAVISSRFPVNFFIRYSRIDLPATFIVFPAPRPLG LALQGGKPDTGEAVAAAAPGYEGDLAKISDYRGGEPLKLIHWRLSAKHDVFKVKELSATAGEPLTLDLERIPGRDLEQRL CACCFLVNRLVKGGRQVGLRLGEKVIAPAAPTRGHRLKLLGELALYGEAKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31351; Mature: 31351
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTKGGGLYIAATLLLGVSAVNTGNNLLFLIVAAMLGFMAVTGVLGWLNLRGLSARVQL CEECCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PDEVYAGTTTPLSVHLENRKKLLPSFLIDIGVSSGFVWFLMLQPRRPESASLFLTFSSRG CHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCC SSSLPSAVISSRFPVNFFIRYSRIDLPATFIVFPAPRPLGLALQGGKPDTGEAVAAAAPG CCCCCHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCEEEEECCC YEGDLAKISDYRGGEPLKLIHWRLSAKHDVFKVKELSATAGEPLTLDLERIPGRDLEQRL CCCCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEHHHCCCCCHHHHH CACCFLVNRLVKGGRQVGLRLGEKVIAPAAPTRGHRLKLLGELALYGEAKD HHHHHHHHHHHHCCHHHHHHHCCEEECCCCCCCCCEEEEEEHEEEECCCCC >Mature Secondary Structure MKLTKGGGLYIAATLLLGVSAVNTGNNLLFLIVAAMLGFMAVTGVLGWLNLRGLSARVQL CEECCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PDEVYAGTTTPLSVHLENRKKLLPSFLIDIGVSSGFVWFLMLQPRRPESASLFLTFSSRG CHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCC SSSLPSAVISSRFPVNFFIRYSRIDLPATFIVFPAPRPLGLALQGGKPDTGEAVAAAAPG CCCCCHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCEEEEECCC YEGDLAKISDYRGGEPLKLIHWRLSAKHDVFKVKELSATAGEPLTLDLERIPGRDLEQRL CCCCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEHHHCCCCCHHHHH CACCFLVNRLVKGGRQVGLRLGEKVIAPAAPTRGHRLKLLGELALYGEAKD HHHHHHHHHHHHCCHHHHHHHCCEEECCCCCCCCCEEEEEEHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA