| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 308535209
Identifier: 308535209
GI number: 308535209
Start: 1166732
End: 1167538
Strand: Direct
Name: 308535209
Synonym: NA
Alternate gene names: NA
Gene position: 1166732-1167538 (Clockwise)
Preceding gene: 197117398
Following gene: 197117400
Centisome position: 25.28
GC content: 63.07
Gene sequence:
>807_bases ATGATGAGTGACGCGGAGGTTCCGGGTCTGGAACCGCTGCGGGCTTGGTTTGCCTCGTATTGCGATTCCTTCCGCAGCGC GGACCCGGAACAGCAGCGCAACTTCGACCTCAAGGAAAAACATACCCGCAACGTCTGCCTCGCCGCCCGCCGCATCGCGC AGGGGGAGAGCCCGAGGTTCTGCACGCTGGCGGAGGTGGCCGCCGTTTGCCATGACCTGGGCCGCTTCCCCCAATTCAGG GACTACCACACCTTTAAAGACAGCGATTCCGTGAACCACGCCCATCTCTCGGCCCAAGTGGTTAAGCAGCGCGCCCTGCT CGATTTCCTCCCTCGTGAGGAGCGGGAAGCTGTGGAGATAGCGGTACGGCTGCATAACGCCTTCGAGGTCCCGGCCGGAC TTCCCCCTGAAACGGAAAAACTGCTGCGTCTGCTGCGCGATGCCGACAAGCTCGACATCTGGCGCGTCTTCATCGAGTAC TTCGAAACTCCGGAAGAGGAGCGCCCCTCCGCCGCCGGCCTCGGGTTTCCGGACCTGCCGGGGTGCTCTCCCGAAGTGAT GGATGCGGTGAGAAAAGGGAAGATGGTGCACCTCTCCAGCCTGAGGAGCCTGAACGACTTCAAGCTCCTGCAGTTGTCAT GGATCTACGACATCAACTTCGTCTCGACTCTCAGGCTTATCCGGGAGAGGGGCGTGCTGGAGCAGTTCGCCGCCATCCTC CCCGCTGACGAGGCGGTCGCCGACGTGCTGGCACAGGTGCGGGGATATCTGGAGCGGCGCCTGAAAGAGGGCGCCGGCGC GGCATAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: metal-dependent phosphoesterase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; HD Domain Protein; Metal-Dependent Phosphohydrolase HD Sub Domain; Metal-Dependent Phosphoesterase; Metal-Dependent Phosphohydrolase HD Region
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
NA
Sequences:
>Translated_268_residues MMSDAEVPGLEPLRAWFASYCDSFRSADPEQQRNFDLKEKHTRNVCLAARRIAQGESPRFCTLAEVAAVCHDLGRFPQFR DYHTFKDSDSVNHAHLSAQVVKQRALLDFLPREEREAVEIAVRLHNAFEVPAGLPPETEKLLRLLRDADKLDIWRVFIEY FETPEEERPSAAGLGFPDLPGCSPEVMDAVRKGKMVHLSSLRSLNDFKLLQLSWIYDINFVSTLRLIRERGVLEQFAAIL PADEAVADVLAQVRGYLERRLKEGAGAA >Mature_268_residues MMSDAEVPGLEPLRAWFASYCDSFRSADPEQQRNFDLKEKHTRNVCLAARRIAQGESPRFCTLAEVAAVCHDLGRFPQFR DYHTFKDSDSVNHAHLSAQVVKQRALLDFLPREEREAVEIAVRLHNAFEVPAGLPPETEKLLRLLRDADKLDIWRVFIEY FETPEEERPSAAGLGFPDLPGCSPEVMDAVRKGKMVHLSSLRSLNDFKLLQLSWIYDINFVSTLRLIRERGVLEQFAAIL PADEAVADVLAQVRGYLERRLKEGAGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30392; Mature: 30392
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDAEVPGLEPLRAWFASYCDSFRSADPEQQRNFDLKEKHTRNVCLAARRIAQGESPRF CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC CTLAEVAAVCHDLGRFPQFRDYHTFKDSDSVNHAHLSAQVVKQRALLDFLPREEREAVEI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVRLHNAFEVPAGLPPETEKLLRLLRDADKLDIWRVFIEYFETPEEERPSAAGLGFPDLP HHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GCSPEVMDAVRKGKMVHLSSLRSLNDFKLLQLSWIYDINFVSTLRLIRERGVLEQFAAIL CCCHHHHHHHHHCCEEEHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHC PADEAVADVLAQVRGYLERRLKEGAGAA CCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMSDAEVPGLEPLRAWFASYCDSFRSADPEQQRNFDLKEKHTRNVCLAARRIAQGESPRF CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC CTLAEVAAVCHDLGRFPQFRDYHTFKDSDSVNHAHLSAQVVKQRALLDFLPREEREAVEI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH AVRLHNAFEVPAGLPPETEKLLRLLRDADKLDIWRVFIEYFETPEEERPSAAGLGFPDLP HHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GCSPEVMDAVRKGKMVHLSSLRSLNDFKLLQLSWIYDINFVSTLRLIRERGVLEQFAAIL CCCHHHHHHHHHCCEEEHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHC PADEAVADVLAQVRGYLERRLKEGAGAA CCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA