| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is accD5 [H]
Identifier: 308513341
GI number: 308513341
Start: 3619432
End: 3621042
Strand: Direct
Name: accD5 [H]
Synonym: NA
Alternate gene names: 308513341
Gene position: 3619432-3621042 (Clockwise)
Preceding gene: 39998387
Following gene: 308513342
Centisome position: 94.9
GC content: 61.7
Gene sequence:
>1611_bases ATGAAAGAAGGTTACGACCTGATTCAGCGCCCCATCAAATCGGTCAGCATCGATCAGATCGAAAAGCAGCACTTCAAGAA AAGGATGACCGTCTGGGAGCGGATCAAGGTGCTTAGCGACAAGGAGCCCAACGTTCTCTACCAGAACTGGGGCAAGAACC TGGACGGCGCCTCGCTGGTGACCGCCATTCTCAATATCGGCGGCCGTGATGTGGCGGTATACGGCCACGACTTTACCGTA CGCGCCGGGTCCATCGACGCCACCAACGGCAGCAAACTGGCCCGTCTCTTCAACATGGCCGGCGAAAAGGGGATTCCCCT CATCGGCATGAACGACTCCGCAGGCGCCTTCGTTCCGGCCGGGGTCGGCGGTCTCGACGGCTATGCCGAGGCGTTCACGG CGCTGCGCAAGATCAGCGGCGTAGTCCCCTCCATCATGTGCATGTTCGGCTTCAACGCCGGCGGCGGTTCCTACCTGCCG CGGCAGGGGAGCTTCGTCATTCAGCCCGCCGACACCTTCTTCGGCCTCACCGGGCCCGGCGTCGTCAAATCGGTTCTCGG CGAGGACATCACTCCCGATGAGCTTGGCGGCCCCAAGGTCCACGGCAAATCGGGCGTAGCCGACCTGACCGTCTCCGACG AGGTAGCTGCCCTCCGGACAGCGGTCCGGCTCCTCTCCTACATCCCTGACAACAACAGCGTGGGCGCACCGTTCCAGGAA ACCAGCGATCCTCTGAACCGCAAAACCTGGGAGATCAACACCCTCCTGAAAAAGGCCTTCAACTCGCCGACCGGCTTCAA CACTCCGTTCGACGTCTCCATCATCATCCAGCAAATCTGTGACCATGGTGACTACTTCGAACTGCAGCCTGAACGGGCAA AGGAAGCGGTAACGGCCTTCGGCCGCCTGGGGGGCCAAGTCGTGGGCTTCGTTGCCAACAACTCGGCCGTGGCTTCGGGT CAGATCGACTGCGACTCGGCGGTGAAAATTGCCCGCTTCGTCCGGTTCTGCAACATCTACAACATCCCCATCATCTTCAT GGAAGACACCACCGGCTTCCTGCCGGGTCGCGAACAGGAAAGCCGCGGCATTGTCCAGGCCGGCCGCTCCATGCTCGACG CCATCGTCGACGTGCGCACCCCGCGAATCCTGCTGATTCTGCGCAACGCCTTCGGGGGCGCTTACGCCTCCTACAACAAC TATCCCACCGGCGCCGACCTGGTGCTGGCCCTTCCCACCACCCGCCTCGCCGTCATGGGTCCTGCCGGCAAGGAATTCGT CTACAAGGACGAGATCCGCAAGATCCGCGGCGCCGTTGCCGACATGGTCAAGAAGGGGGTTGAAGAGCGCACCAAGGCTG GAATGGAGGCCGGTGCAGCCAAGAAGGATGCGGAGAAGGAAGCGGCCGAGTGGCTGAAGGGCCAGGAAGCCGCCCTGAAT CAGCGGTACGAAAAAGAACTGATGAACCCGAAGGAAGGTCTGGCCCTGGGCTCCATCTCCTCCATCGTCATGCCGACCGA TCTGCGCCAGGTACTCGGCGAAAACATCGCCTTCCTGATGCGGCACTACAAGCCGTCGCCCATGTGCGGCCCGCAGCGCG AATTCCACTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: carboxyl transferase domain-containing protein
Products: NA
Alternate protein names: PCCase; Propanoyl-CoA:carbon dioxide ligase [H]
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
NA
Sequences:
>Translated_536_residues MKEGYDLIQRPIKSVSIDQIEKQHFKKRMTVWERIKVLSDKEPNVLYQNWGKNLDGASLVTAILNIGGRDVAVYGHDFTV RAGSIDATNGSKLARLFNMAGEKGIPLIGMNDSAGAFVPAGVGGLDGYAEAFTALRKISGVVPSIMCMFGFNAGGGSYLP RQGSFVIQPADTFFGLTGPGVVKSVLGEDITPDELGGPKVHGKSGVADLTVSDEVAALRTAVRLLSYIPDNNSVGAPFQE TSDPLNRKTWEINTLLKKAFNSPTGFNTPFDVSIIIQQICDHGDYFELQPERAKEAVTAFGRLGGQVVGFVANNSAVASG QIDCDSAVKIARFVRFCNIYNIPIIFMEDTTGFLPGREQESRGIVQAGRSMLDAIVDVRTPRILLILRNAFGGAYASYNN YPTGADLVLALPTTRLAVMGPAGKEFVYKDEIRKIRGAVADMVKKGVEERTKAGMEAGAAKKDAEKEAAEWLKGQEAALN QRYEKELMNPKEGLALGSISSIVMPTDLRQVLGENIAFLMRHYKPSPMCGPQREFH >Mature_536_residues MKEGYDLIQRPIKSVSIDQIEKQHFKKRMTVWERIKVLSDKEPNVLYQNWGKNLDGASLVTAILNIGGRDVAVYGHDFTV RAGSIDATNGSKLARLFNMAGEKGIPLIGMNDSAGAFVPAGVGGLDGYAEAFTALRKISGVVPSIMCMFGFNAGGGSYLP RQGSFVIQPADTFFGLTGPGVVKSVLGEDITPDELGGPKVHGKSGVADLTVSDEVAALRTAVRLLSYIPDNNSVGAPFQE TSDPLNRKTWEINTLLKKAFNSPTGFNTPFDVSIIIQQICDHGDYFELQPERAKEAVTAFGRLGGQVVGFVANNSAVASG QIDCDSAVKIARFVRFCNIYNIPIIFMEDTTGFLPGREQESRGIVQAGRSMLDAIVDVRTPRILLILRNAFGGAYASYNN YPTGADLVLALPTTRLAVMGPAGKEFVYKDEIRKIRGAVADMVKKGVEERTKAGMEAGAAKKDAEKEAAEWLKGQEAALN QRYEKELMNPKEGLALGSISSIVMPTDLRQVLGENIAFLMRHYKPSPMCGPQREFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI119943100, Length=443, Percent_Identity=36.7945823927765, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI295821216, Length=463, Percent_Identity=35.2051835853132, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI11545863, Length=462, Percent_Identity=27.2727272727273, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI134142062, Length=308, Percent_Identity=26.6233766233766, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI38679960, Length=355, Percent_Identity=24.5070422535211, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI38679974, Length=355, Percent_Identity=24.5070422535211, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI38679971, Length=355, Percent_Identity=24.5070422535211, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI38679977, Length=355, Percent_Identity=24.5070422535211, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI38679967, Length=355, Percent_Identity=24.5070422535211, Blast_Score=75, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25147362, Length=418, Percent_Identity=37.5598086124402, Blast_Score=271, Evalue=8e-73, Organism=Caenorhabditis elegans, GI25147359, Length=418, Percent_Identity=37.5598086124402, Blast_Score=271, Evalue=8e-73, Organism=Caenorhabditis elegans, GI17552936, Length=499, Percent_Identity=25.8517034068136, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71997163, Length=295, Percent_Identity=23.0508474576271, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323863, Length=318, Percent_Identity=25.4716981132075, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324343, Length=318, Percent_Identity=24.5283018867925, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24586065, Length=467, Percent_Identity=25.9100642398287, Blast_Score=143, Evalue=4e-34, Organism=Drosophila melanogaster, GI161076407, Length=350, Percent_Identity=24.2857142857143, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24586460, Length=350, Percent_Identity=24.2857142857143, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI161076409, Length=350, Percent_Identity=24.2857142857143, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24586458, Length=350, Percent_Identity=24.2857142857143, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: =6.4.1.3 [H]
Molecular weight: Translated: 58108; Mature: 58108
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEGYDLIQRPIKSVSIDQIEKQHFKKRMTVWERIKVLSDKEPNVLYQNWGKNLDGASLV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHH TAILNIGGRDVAVYGHDFTVRAGSIDATNGSKLARLFNMAGEKGIPLIGMNDSAGAFVPA HHHHHCCCCEEEEECCCEEEEECCEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC GVGGLDGYAEAFTALRKISGVVPSIMCMFGFNAGGGSYLPRQGSFVIQPADTFFGLTGPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCCHH VVKSVLGEDITPDELGGPKVHGKSGVADLTVSDEVAALRTAVRLLSYIPDNNSVGAPFQE HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHH TSDPLNRKTWEINTLLKKAFNSPTGFNTPFDVSIIIQQICDHGDYFELQPERAKEAVTAF CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHH GRLGGQVVGFVANNSAVASGQIDCDSAVKIARFVRFCNIYNIPIIFMEDTTGFLPGREQE HHCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH SRGIVQAGRSMLDAIVDVRTPRILLILRNAFGGAYASYNNYPTGADLVLALPTTRLAVMG HCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCHHCCCCCCCCCCCEEEEECCCEEEEEC PAGKEFVYKDEIRKIRGAVADMVKKGVEERTKAGMEAGAAKKDAEKEAAEWLKGQEAALN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH QRYEKELMNPKEGLALGSISSIVMPTDLRQVLGENIAFLMRHYKPSPMCGPQREFH HHHHHHHCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKEGYDLIQRPIKSVSIDQIEKQHFKKRMTVWERIKVLSDKEPNVLYQNWGKNLDGASLV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHH TAILNIGGRDVAVYGHDFTVRAGSIDATNGSKLARLFNMAGEKGIPLIGMNDSAGAFVPA HHHHHCCCCEEEEECCCEEEEECCEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC GVGGLDGYAEAFTALRKISGVVPSIMCMFGFNAGGGSYLPRQGSFVIQPADTFFGLTGPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCCHH VVKSVLGEDITPDELGGPKVHGKSGVADLTVSDEVAALRTAVRLLSYIPDNNSVGAPFQE HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHH TSDPLNRKTWEINTLLKKAFNSPTGFNTPFDVSIIIQQICDHGDYFELQPERAKEAVTAF CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHH GRLGGQVVGFVANNSAVASGQIDCDSAVKIARFVRFCNIYNIPIIFMEDTTGFLPGREQE HHCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH SRGIVQAGRSMLDAIVDVRTPRILLILRNAFGGAYASYNNYPTGADLVLALPTTRLAVMG HCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCHHCCCCCCCCCCCEEEEECCCEEEEEC PAGKEFVYKDEIRKIRGAVADMVKKGVEERTKAGMEAGAAKKDAEKEAAEWLKGQEAALN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH QRYEKELMNPKEGLALGSISSIVMPTDLRQVLGENIAFLMRHYKPSPMCGPQREFH HHHHHHHCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]