| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is epsE [H]
Identifier: 308513302
GI number: 308513302
Start: 1656456
End: 1657250
Strand: Direct
Name: epsE [H]
Synonym: NA
Alternate gene names: 308513302
Gene position: 1656456-1657250 (Clockwise)
Preceding gene: 39996610
Following gene: 39996611
Centisome position: 43.43
GC content: 46.04
Gene sequence:
>795_bases TTGCCAAGGTTCAGCGTCGTCATACCCTGCTTCAACCAGGGGGAATACGTAAACGAGGCGATAGCGTCGGTATTGAATCA GTCGTGTGACGACTACGAGATTATCGTGGTGGATGACGGTTCCACCGACCAGGCAACGGTGACAGTGCTGGACAGACTCG ATCACTCTGGCGTAAAGTTGGTCCGAACCTCAAATCAAGGTCTTGCTGCGGCGCGGAACAACGGCATAACTGCAGCATGC GCTGAATTTATTCTGCCGCTCGATGCTGATGATCGCATTGGTCCTGCCTACCTCGAAAGAGCAGGAGCGATTCTTGGCTC ACATCCTGAAGTCGGGTTCGTCTATTGTCTGGCTGAGTTGTTTGACGGTGCGCGCGGAAAATTTTATCTGAACAACGCTT CCTTGGAGGATATGCTGTGGGACAGTCGAGTGTTCTGCAGTGCACTTTTCAGGAAGTCCGACTGGGCCGCTGTAGGCGGC TACAATAGTAATATGGTATATGGCTGGGAGGATTGGGACTTCTGGTTATCGTTGCTTGAACTGGGTAAGACGCCTTATAT GATAGAAGAGGTGATGTTTTTTTATAGGGTAAAGCACAATTCAATGATACGTTCCATGACATTAGATAATAAGATAGCAA TGCACCAACAGCTTTATAATAACCACCGTAGACTATACGGCAAAATAGATGATATTGACTTTGAGAAATATCATCGTCGT AGAGGAACTGTCAGGTATAAACTTATTGAGCATATTAAAAAGCTAATGTTCAATGCCAGATATTGGAATAAATAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
NA
Sequences:
>Translated_264_residues MPRFSVVIPCFNQGEYVNEAIASVLNQSCDDYEIIVVDDGSTDQATVTVLDRLDHSGVKLVRTSNQGLAAARNNGITAAC AEFILPLDADDRIGPAYLERAGAILGSHPEVGFVYCLAELFDGARGKFYLNNASLEDMLWDSRVFCSALFRKSDWAAVGG YNSNMVYGWEDWDFWLSLLELGKTPYMIEEVMFFYRVKHNSMIRSMTLDNKIAMHQQLYNNHRRLYGKIDDIDFEKYHRR RGTVRYKLIEHIKKLMFNARYWNK >Mature_263_residues PRFSVVIPCFNQGEYVNEAIASVLNQSCDDYEIIVVDDGSTDQATVTVLDRLDHSGVKLVRTSNQGLAAARNNGITAACA EFILPLDADDRIGPAYLERAGAILGSHPEVGFVYCLAELFDGARGKFYLNNASLEDMLWDSRVFCSALFRKSDWAAVGGY NSNMVYGWEDWDFWLSLLELGKTPYMIEEVMFFYRVKHNSMIRSMTLDNKIAMHQQLYNNHRRLYGKIDDIDFEKYHRRR GTVRYKLIEHIKKLMFNARYWNK
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787259, Length=120, Percent_Identity=36.6666666666667, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790044, Length=98, Percent_Identity=32.6530612244898, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 30401; Mature: 30270
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFSVVIPCFNQGEYVNEAIASVLNQSCDDYEIIVVDDGSTDQATVTVLDRLDHSGVKL CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEE VRTSNQGLAAARNNGITAACAEFILPLDADDRIGPAYLERAGAILGSHPEVGFVYCLAEL EEECCCCCEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH FDGARGKFYLNNASLEDMLWDSRVFCSALFRKSDWAAVGGYNSNMVYGWEDWDFWLSLLE HCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCHHHHHHHHH LGKTPYMIEEVMFFYRVKHNSMIRSMTLDNKIAMHQQLYNNHRRLYGKIDDIDFEKYHRR HCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCHHEEECCCCCCCHHHHHHH RGTVRYKLIEHIKKLMFNARYWNK CCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PRFSVVIPCFNQGEYVNEAIASVLNQSCDDYEIIVVDDGSTDQATVTVLDRLDHSGVKL CCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEE VRTSNQGLAAARNNGITAACAEFILPLDADDRIGPAYLERAGAILGSHPEVGFVYCLAEL EEECCCCCEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH FDGARGKFYLNNASLEDMLWDSRVFCSALFRKSDWAAVGGYNSNMVYGWEDWDFWLSLLE HCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCHHHHHHHHH LGKTPYMIEEVMFFYRVKHNSMIRSMTLDNKIAMHQQLYNNHRRLYGKIDDIDFEKYHRR HCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCHHEEECCCCCCCHHHHHHH RGTVRYKLIEHIKKLMFNARYWNK CCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]