| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 308513284
Identifier: 308513284
GI number: 308513284
Start: 617517
End: 618668
Strand: Reverse
Name: 308513284
Synonym: NA
Alternate gene names: NA
Gene position: 618668-617517 (Counterclockwise)
Preceding gene: 39995692
Following gene: 39995690
Centisome position: 16.22
GC content: 61.89
Gene sequence:
>1152_bases ATGGTCGTCGATGAGGTCACCTACCTCTTTTCGGCGTGCCGGCACTCCATTCCCTTCACCCGCACCGAGGAAGTTTTCTG CGGCGAACTGGTAGCCGCCTTTGCCGTGCTCTACTCGGGGTTCAGACAGGAGGGCTATGCAGCTCACTTTCGCACCGCAC TCCTGGCCTCCCTGATGGACATCACGGTGGCCCGCTTCCTCCGGGGCGACCACCGCAAGGCATTCTGGTCCATCCAGCAG TTGATCCAGCTCCTCAAGAACCTCTCCTACCAGCGCTACGAGGGGAAGCCCGCCACCACCGGCTTCCTCGTATACCGGAC AACGCTGGTGGAGTTCCGCAAACGGGTGCGCTACCAGAAGAGCGCATGGCTCGATCTGAATCCCCAGCAGGCGCTGACGC CCACTCTTTTCGACAATCCCATCACCTACCGCTTCATCGATGGAACCAATTCGCTGTTTGCCGCCAATGTCCAGATGCAG CTCACCGGTATCGTCAAGCCCAGCGGCCTTGCCGAACGGGATGAGGTGGACCGCCATGCCCACCGCAGCGTCTTCGCCCT GCTCCGAAACGCCGGGGCCGGCGCCTTTGCGGTCAAAGTCAACGAGTCATCGGAAATCGAAGCCATCATCTGCCCCGACA AACTCCTGGTGCGACGCAGGGGGCAATGGGGCATTTTTGATCCAGACATCTTCCGCTCGTTCCTGGCCGGCTGCCTCGAT CCGGAGGAAATCGAGGAACTGGCCTGGACCCTCTATACGCTTTCCAAAGCCCGCCACGGCACGGTAGTGCTGATCCTGGA GCGGGGGGACCGGCAACTTGCCCGTCTCAAGCGGGGCTCGGTGGGGGGCGACGACCCCCTTGGCATGATGTTGGCGAAGC GGGTGAAAGGAAAGACCATCAGCCAGCTCAAGCAATCGGGCGAACTGATGCGACTCCTCTCGTCCGACGGCATGACCGTC TTCAGCCGCCGTGGCAGGCTGCTGGACACGGGGGTCATCATTGACACCTCCCACGCCCGGGAACTGGTGACCGGCGGCGG CCGTACTACCGCGGCCACGGCAGCTTCCTTTTCGGGGAGGGTCATCAAGGTTTCCGAGGATGGCCCCATCGAACTCTACC AGGGAGGAGCGCGCGTTTATTCTTTTGGGTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
NA
Sequences:
>Translated_383_residues MVVDEVTYLFSACRHSIPFTRTEEVFCGELVAAFAVLYSGFRQEGYAAHFRTALLASLMDITVARFLRGDHRKAFWSIQQ LIQLLKNLSYQRYEGKPATTGFLVYRTTLVEFRKRVRYQKSAWLDLNPQQALTPTLFDNPITYRFIDGTNSLFAANVQMQ LTGIVKPSGLAERDEVDRHAHRSVFALLRNAGAGAFAVKVNESSEIEAIICPDKLLVRRRGQWGIFDPDIFRSFLAGCLD PEEIEELAWTLYTLSKARHGTVVLILERGDRQLARLKRGSVGGDDPLGMMLAKRVKGKTISQLKQSGELMRLLSSDGMTV FSRRGRLLDTGVIIDTSHARELVTGGGRTTAATAASFSGRVIKVSEDGPIELYQGGARVYSFG >Mature_383_residues MVVDEVTYLFSACRHSIPFTRTEEVFCGELVAAFAVLYSGFRQEGYAAHFRTALLASLMDITVARFLRGDHRKAFWSIQQ LIQLLKNLSYQRYEGKPATTGFLVYRTTLVEFRKRVRYQKSAWLDLNPQQALTPTLFDNPITYRFIDGTNSLFAANVQMQ LTGIVKPSGLAERDEVDRHAHRSVFALLRNAGAGAFAVKVNESSEIEAIICPDKLLVRRRGQWGIFDPDIFRSFLAGCLD PEEIEELAWTLYTLSKARHGTVVLILERGDRQLARLKRGSVGGDDPLGMMLAKRVKGKTISQLKQSGELMRLLSSDGMTV FSRRGRLLDTGVIIDTSHARELVTGGGRTTAATAASFSGRVIKVSEDGPIELYQGGARVYSFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42713; Mature: 42713
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVDEVTYLFSACRHSIPFTRTEEVFCGELVAAFAVLYSGFRQEGYAAHFRTALLASLMD CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ITVARFLRGDHRKAFWSIQQLIQLLKNLSYQRYEGKPATTGFLVYRTTLVEFRKRVRYQK HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH SAWLDLNPQQALTPTLFDNPITYRFIDGTNSLFAANVQMQLTGIVKPSGLAERDEVDRHA CCCCCCCCHHHCCCHHCCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHH HRSVFALLRNAGAGAFAVKVNESSEIEAIICPDKLLVRRRGQWGIFDPDIFRSFLAGCLD HHHHHHHHHCCCCCEEEEEECCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHCCC PEEIEELAWTLYTLSKARHGTVVLILERGDRQLARLKRGSVGGDDPLGMMLAKRVKGKTI HHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH SQLKQSGELMRLLSSDGMTVFSRRGRLLDTGVIIDTSHARELVTGGGRTTAATAASFSGR HHHHHHHHHHHHHHCCCCEEHHCCCCEEECCEEEECHHHHHHHCCCCCCHHHHHHCCCCC VIKVSEDGPIELYQGGARVYSFG EEEECCCCCEEEEECCCEEEECC >Mature Secondary Structure MVVDEVTYLFSACRHSIPFTRTEEVFCGELVAAFAVLYSGFRQEGYAAHFRTALLASLMD CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ITVARFLRGDHRKAFWSIQQLIQLLKNLSYQRYEGKPATTGFLVYRTTLVEFRKRVRYQK HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH SAWLDLNPQQALTPTLFDNPITYRFIDGTNSLFAANVQMQLTGIVKPSGLAERDEVDRHA CCCCCCCCHHHCCCHHCCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHH HRSVFALLRNAGAGAFAVKVNESSEIEAIICPDKLLVRRRGQWGIFDPDIFRSFLAGCLD HHHHHHHHHCCCCCEEEEEECCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHCCC PEEIEELAWTLYTLSKARHGTVVLILERGDRQLARLKRGSVGGDDPLGMMLAKRVKGKTI HHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH SQLKQSGELMRLLSSDGMTVFSRRGRLLDTGVIIDTSHARELVTGGGRTTAATAASFSGR HHHHHHHHHHHHHHCCCCEEHHCCCCEEECCEEEECHHHHHHHCCCCCCHHHHHHCCCCC VIKVSEDGPIELYQGGARVYSFG EEEECCCCCEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA