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The map label for this gene is yodA [H]

Identifier: 308065967

GI number: 308065967

Start: 1345837

End: 1346487

Strand: Direct

Name: yodA [H]

Synonym: NA

Alternate gene names: 308065967

Gene position: 1345837-1346487 (Clockwise)

Preceding gene: 16764613

Following gene: 16764615

Centisome position: 27.71

GC content: 46.39

Gene sequence:

>651_bases
TTGGTGATTCATTTAAAAAAACTGACAATGCTTCTGGGAATGCTGTTGGTAAATAGTCCTGCCTTCGCGCATGGTCATCA
TGCTCATGGCGCGCCGATGACGGAGGTTGAGCAAAAAGCGGCAGCGGGCGTGTTTGATGACGCTAATGTACGCGATCGCG
CGCTCACCGACTGGGATGGTATGTGGCAATCCGTCTATCCTTATCTGGTCAGCGGCGAGCTGGACCCTGTCTTCAGGCAA
AAGGCGAAGAAAGACCCGGAGAAAACGTTTGAGGATATTAAAGCGTATTATCGCAAAGGATACGTGACGAATGTTGAGAC
GATCGGCATTGAAAATGGCGTTATAGAATTCCATCGCGACAATAACGTTGCATCCTGTAAATACAATTATGCCGGCTATA
AAATTCTGACTTACGCATCGGGTAAAAAAGGGGTGCGCTACCTGTTCGAATGTAAAGATGCGAATAGCAAAGCGCCTAAA
TATGTTCAGTTTAGCGATCATATCATTGCCCCGCGCAAATCGGCGCACTTCCATATCTTTATGGGAAATACCTCGCAGCA
GGCATTGTTGCAAGAGATGGAAAACTGGCCTACCTATTATCCTTATCAGTTAAAGGCGAATGAGGTCGTTGACGAAATGC
TACATCATTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: Cadmium-induced protein YodA [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:
NA

Sequences:

>Translated_216_residues
MVIHLKKLTMLLGMLLVNSPAFAHGHHAHGAPMTEVEQKAAAGVFDDANVRDRALTDWDGMWQSVYPYLVSGELDPVFRQ
KAKKDPEKTFEDIKAYYRKGYVTNVETIGIENGVIEFHRDNNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPK
YVQFSDHIIAPRKSAHFHIFMGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH
>Mature_216_residues
MVIHLKKLTMLLGMLLVNSPAFAHGHHAHGAPMTEVEQKAAAGVFDDANVRDRALTDWDGMWQSVYPYLVSGELDPVFRQ
KAKKDPEKTFEDIKAYYRKGYVTNVETIGIENGVIEFHRDNNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPK
YVQFSDHIIAPRKSAHFHIFMGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH

Specific function: May be involved in stress response [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. YodA family [H]

Homologues:

Organism=Escherichia coli, GI1788284, Length=216, Percent_Identity=71.7592592592593, Blast_Score=348, Evalue=2e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR015304 [H]

Pfam domain/function: PF09223 YodA [H]

EC number: NA

Molecular weight: Translated: 24723; Mature: 24723

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIHLKKLTMLLGMLLVNSPAFAHGHHAHGAPMTEVEQKAAAGVFDDANVRDRALTDWDG
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
MWQSVYPYLVSGELDPVFRQKAKKDPEKTFEDIKAYYRKGYVTNVETIGIENGVIEFHRD
HHHHHCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECC
NNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPKYVQFSDHIIAPRKSAHFHIF
CCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCEECCCCCCEEEEE
MGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH
ECCCHHHHHHHHHHCCCCCCCEEECHHHHHHHHHCC
>Mature Secondary Structure
MVIHLKKLTMLLGMLLVNSPAFAHGHHAHGAPMTEVEQKAAAGVFDDANVRDRALTDWDG
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
MWQSVYPYLVSGELDPVFRQKAKKDPEKTFEDIKAYYRKGYVTNVETIGIENGVIEFHRD
HHHHHCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECC
NNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPKYVQFSDHIIAPRKSAHFHIF
CCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCEECCCCCCEEEEE
MGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH
ECCCHHHHHHHHHHCCCCCCCEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]