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The map label for this gene is 30265200

Identifier: 30265200

GI number: 30265200

Start: 4893673

End: 4893885

Strand: Reverse

Name: 30265200

Synonym: BA_5404

Alternate gene names: NA

Gene position: 4893885-4893673 (Counterclockwise)

Preceding gene: 30265201

Following gene: 30265199

Centisome position: 93.62

GC content: 38.5

Gene sequence:

>213_bases
TTGAAGGTGGAGCCTATGGGTGTAAAAAATAAAATTAAAGAATTAAGAAAGCAACATCATATAACGCAAGTTGAAATGGC
AAAGGCGATGCAGGTGACGCGGCAGACAATCGTGGCGATTGAAAACCATCATTACAACCCGAGTCTAGAGTTATCCTTAA
AAATCGCCAAATATTTTGGAGTGAAGGTGGAAGAAATATTTACGCTAGAGTAA

Upstream 100 bases:

>100_bases
TTAGAAAAGATGTTCAGTGAAATGTTTTTCTAAAATTTGTAAAGATATCTTTACTTACAACTGGAAAATATTTATAATTT
AAGTAAAGATATCTTTACTT

Downstream 100 bases:

>100_bases
GGGGAGAGAAAAATGCAGGATGAGTTTGAGAGATTTCAGTCAGATAAAGCGTTTAAATATGTAGGGTTATTTTTCGCGAT
TAGTTTAGCTGTGTGGAGTT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKVEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE

Sequences:

>Translated_70_residues
MKVEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE
>Mature_70_residues
MKVEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8176; Mature: 8176

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFG
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHC
VKVEEIFTLE
CEEHHEEECC
>Mature Secondary Structure
MKVEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFG
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHC
VKVEEIFTLE
CEEHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]