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The map label for this gene is fabD [H]

Identifier: 30263855

GI number: 30263855

Start: 3667011

End: 3667955

Strand: Reverse

Name: fabD [H]

Synonym: BA_3990

Alternate gene names: 30263855

Gene position: 3667955-3667011 (Counterclockwise)

Preceding gene: 30263856

Following gene: 30263854

Centisome position: 70.17

GC content: 40.63

Gene sequence:

>945_bases
ATGGGAAAACTAGCATTTCTTTTTCCGGGCCAAGGTTCACAGGCAGTTGGAATGGGTAAACAGTTAGCAGAGAATAATAA
AGAGGTTGCAAATGTATTTGCAAAAGCAGATGAAGTGTTGCAAGATTCACTTTCAGAAGTGATTTTTGAAGGGTCGCAGG
AAAAGCTTACGTTAACGACAAATGCGCAACCGGCTTTATTAACAACGAGTTTTGCTATTTTGACAGCTTTAAAAGAGTAT
GATATTACACCAGACTTTGTCGCAGGGCATAGTTTAGGTGAGTATAGCGCTCTTGTAGCAGCGGGTGCATTAACTTTTGA
GGATGCAGTATATGCTGTAAGGAAACGTGGGGAATATATGGAAGAAGCTGTTCCTGGCGGAGAAGGTGCAATGGCGGCTA
TTTTAGGTGCTGATCCACATATGCTGAAACGAGTTACAGAAGAGGTAACAGGTGAAGGGTATGCAGTACAAATCGCTAAT
ATGAATAGTACGAAGCAAATTGTAATTTCTGGAACAAAGCAAGGGGTCGAGATTGCTTCTCAAAGAGCGAAAGAAAATGG
TGCAAAGAGAGCGATTCCGCTTAAAGTAAGTGGACCGTTCCACTCTGCGCTTATGAAGCCAGCAGCGGAGAAATTCCAAA
GTGTCTTAAATGAAATTACAATTCAAGATACAAATATTCCGGTAATCGCAAATGTAACAGCAGACGTTATTACAAGTGGT
GCGCATATTCAAGAAAAGCTAATCGAACAGCTCTACTCGCCTGTCTTATGGTACCCATCCATTGAATATATGGTGAATCA
AGGGGTCGATACATTTATTGAAATTGGACCTGGGAAAGTACTTGCTGGACTTATGAAGTCAATTGATTCATCAGTGAAAG
CATACGCGATATACGATGAAGAGACATTAAAAGATACCATTTCAAATTTGAGAGGAGAAAACTGA

Upstream 100 bases:

>100_bases
GTGCGATTCGTCAAACGAGAGAAATGGTAGCGAAAGAAGTTATTCCTACTATTTCAAGCGTAATGGAGAAAGAGCCACTC
CAATAAGAGGAGGATTTGAA

Downstream 100 bases:

>100_bases
TGTTAAAAGGGAAAGTAGCATTAGTAACGGGCGCTTCACGTGGAATTGGTCGTGCGATTGCGATTGATTTAGCGAAACAA
GGGGCAAATGTGGTAGTAAA

Product: acyl-carrier-protein S-malonyltransferase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MGKLAFLFPGQGSQAVGMGKQLAENNKEVANVFAKADEVLQDSLSEVIFEGSQEKLTLTTNAQPALLTTSFAILTALKEY
DITPDFVAGHSLGEYSALVAAGALTFEDAVYAVRKRGEYMEEAVPGGEGAMAAILGADPHMLKRVTEEVTGEGYAVQIAN
MNSTKQIVISGTKQGVEIASQRAKENGAKRAIPLKVSGPFHSALMKPAAEKFQSVLNEITIQDTNIPVIANVTADVITSG
AHIQEKLIEQLYSPVLWYPSIEYMVNQGVDTFIEIGPGKVLAGLMKSIDSSVKAYAIYDEETLKDTISNLRGEN

Sequences:

>Translated_314_residues
MGKLAFLFPGQGSQAVGMGKQLAENNKEVANVFAKADEVLQDSLSEVIFEGSQEKLTLTTNAQPALLTTSFAILTALKEY
DITPDFVAGHSLGEYSALVAAGALTFEDAVYAVRKRGEYMEEAVPGGEGAMAAILGADPHMLKRVTEEVTGEGYAVQIAN
MNSTKQIVISGTKQGVEIASQRAKENGAKRAIPLKVSGPFHSALMKPAAEKFQSVLNEITIQDTNIPVIANVTADVITSG
AHIQEKLIEQLYSPVLWYPSIEYMVNQGVDTFIEIGPGKVLAGLMKSIDSSVKAYAIYDEETLKDTISNLRGEN
>Mature_313_residues
GKLAFLFPGQGSQAVGMGKQLAENNKEVANVFAKADEVLQDSLSEVIFEGSQEKLTLTTNAQPALLTTSFAILTALKEYD
ITPDFVAGHSLGEYSALVAAGALTFEDAVYAVRKRGEYMEEAVPGGEGAMAAILGADPHMLKRVTEEVTGEGYAVQIANM
NSTKQIVISGTKQGVEIASQRAKENGAKRAIPLKVSGPFHSALMKPAAEKFQSVLNEITIQDTNIPVIANVTADVITSGA
HIQEKLIEQLYSPVLWYPSIEYMVNQGVDTFIEIGPGKVLAGLMKSIDSSVKAYAIYDEETLKDTISNLRGEN

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=312, Percent_Identity=32.3717948717949, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI27477045, Length=109, Percent_Identity=41.2844036697248, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1787334, Length=298, Percent_Identity=47.3154362416107, Blast_Score=236, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17550940, Length=295, Percent_Identity=30.8474576271186, Blast_Score=120, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI71984332, Length=294, Percent_Identity=29.2517006802721, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24665753, Length=301, Percent_Identity=35.8803986710963, Blast_Score=143, Evalue=1e-34,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 33662; Mature: 33530

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLAFLFPGQGSQAVGMGKQLAENNKEVANVFAKADEVLQDSLSEVIFEGSQEKLTLTT
CCCEEEEECCCCCCHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
NAQPALLTTSFAILTALKEYDITPDFVAGHSLGEYSALVAAGALTFEDAVYAVRKRGEYM
CCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAVPGGEGAMAAILGADPHMLKRVTEEVTGEGYAVQIANMNSTKQIVISGTKQGVEIAS
HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHH
QRAKENGAKRAIPLKVSGPFHSALMKPAAEKFQSVLNEITIQDTNIPVIANVTADVITSG
HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHCC
AHIQEKLIEQLYSPVLWYPSIEYMVNQGVDTFIEIGPGKVLAGLMKSIDSSVKAYAIYDE
HHHHHHHHHHHHCCEECCCCHHHHHHCCCHHEEEECCHHHHHHHHHHHCCCCEEEEEECH
ETLKDTISNLRGEN
HHHHHHHHHHCCCC
>Mature Secondary Structure 
GKLAFLFPGQGSQAVGMGKQLAENNKEVANVFAKADEVLQDSLSEVIFEGSQEKLTLTT
CCEEEEECCCCCCHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
NAQPALLTTSFAILTALKEYDITPDFVAGHSLGEYSALVAAGALTFEDAVYAVRKRGEYM
CCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAVPGGEGAMAAILGADPHMLKRVTEEVTGEGYAVQIANMNSTKQIVISGTKQGVEIAS
HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHH
QRAKENGAKRAIPLKVSGPFHSALMKPAAEKFQSVLNEITIQDTNIPVIANVTADVITSG
HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHCC
AHIQEKLIEQLYSPVLWYPSIEYMVNQGVDTFIEIGPGKVLAGLMKSIDSSVKAYAIYDE
HHHHHHHHHHHHCCEECCCCHHHHHHCCCHHEEEECCHHHHHHHHHHHCCCCEEEEEECH
ETLKDTISNLRGEN
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9534248; 9384377 [H]