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The map label for this gene is yxaC [H]

Identifier: 30263754

GI number: 30263754

Start: 3553002

End: 3553661

Strand: Reverse

Name: yxaC [H]

Synonym: BA_3884

Alternate gene names: 30263754

Gene position: 3553661-3553002 (Counterclockwise)

Preceding gene: 30263755

Following gene: 30263753

Centisome position: 67.98

GC content: 35.91

Gene sequence:

>660_bases
ATGGTCTTCATTATTATTACTGTAGTAGTTTATTTATTGGCGACAAAGTTATATAAAAAATTTACGTTACCGGTGTTAAC
AGTTACAGCGATTATGATTTGTCTATTCCTTACTTTTGGAATCTCTCATCATGAGTATAAGGAAAATGGAGGAGACATTC
TTACAGGGCTATTGAGTCCTGCAATTGTAGCGTTAGCCATACCACTATTTAAAGAGCGAAAGATACTTATGCAAAATTTT
TTATCGATGCTAATCGGCGTAGTGGCAGGTATAGTGGTTTTAACGACTATGAATGTAGTGATTGGTGGAATTTTAAATAT
AGATAAGGAACTTATACTAACCACTCTACCACAATTAGCAACGATACCTATTGCTATTTCATTAGCGGATCAAATTGGCG
GTATTCCATCTATGACTTCTAGTTTTGTCGTTGTTGCAGGAATAACAGGTGCTATGATCGGACCAACAGTACTTAAGTTT
TTCCGTATAACAAGTACGATCGGAAAAGGAGTGGGAATGGGCTGCGCATCACATATTATTGGTGTGAGCCGTCTTATGAA
AGAAGGAGAGAAAGAAGCAACAATCGGTTCGGTGACTATGATTGTAACAGGAATACTCATCAGTATATTTATACCATATG
GAACGAAATTTATATTTTAA

Upstream 100 bases:

>100_bases
TAGTAGTTATAAGCACGGTAGTAACTTTGATTGTTTCAGGGTATATAAGTCAATTGTTAGTAACATCAAAAAAATAAAAT
CGACAAGGTGCACGATGCAA

Downstream 100 bases:

>100_bases
ATTGTAATGGAGATGATGAAAGTGACAACATGGTTTATAGTTACATTATTTATTTTTGGTGCCCTTAAAGTACTTGTTTC
TAGTATGCCAACTTCAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVFIIITVVVYLLATKLYKKFTLPVLTVTAIMICLFLTFGISHHEYKENGGDILTGLLSPAIVALAIPLFKERKILMQNF
LSMLIGVVAGIVVLTTMNVVIGGILNIDKELILTTLPQLATIPIAISLADQIGGIPSMTSSFVVVAGITGAMIGPTVLKF
FRITSTIGKGVGMGCASHIIGVSRLMKEGEKEATIGSVTMIVTGILISIFIPYGTKFIF

Sequences:

>Translated_219_residues
MVFIIITVVVYLLATKLYKKFTLPVLTVTAIMICLFLTFGISHHEYKENGGDILTGLLSPAIVALAIPLFKERKILMQNF
LSMLIGVVAGIVVLTTMNVVIGGILNIDKELILTTLPQLATIPIAISLADQIGGIPSMTSSFVVVAGITGAMIGPTVLKF
FRITSTIGKGVGMGCASHIIGVSRLMKEGEKEATIGSVTMIVTGILISIFIPYGTKFIF
>Mature_219_residues
MVFIIITVVVYLLATKLYKKFTLPVLTVTAIMICLFLTFGISHHEYKENGGDILTGLLSPAIVALAIPLFKERKILMQNF
LSMLIGVVAGIVVLTTMNVVIGGILNIDKELILTTLPQLATIPIAISLADQIGGIPSMTSSFVVVAGITGAMIGPTVLKF
FRITSTIGKGVGMGCASHIIGVSRLMKEGEKEATIGSVTMIVTGILISIFIPYGTKFIF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=32.4074074074074, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 23346; Mature: 23346

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFIIITVVVYLLATKLYKKFTLPVLTVTAIMICLFLTFGISHHEYKENGGDILTGLLSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
AIVALAIPLFKERKILMQNFLSMLIGVVAGIVVLTTMNVVIGGILNIDKELILTTLPQLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TIPIAISLADQIGGIPSMTSSFVVVAGITGAMIGPTVLKFFRITSTIGKGVGMGCASHII
HHHHHEEEHHHHCCCCCHHHCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVSRLMKEGEKEATIGSVTMIVTGILISIFIPYGTKFIF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MVFIIITVVVYLLATKLYKKFTLPVLTVTAIMICLFLTFGISHHEYKENGGDILTGLLSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
AIVALAIPLFKERKILMQNFLSMLIGVVAGIVVLTTMNVVIGGILNIDKELILTTLPQLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TIPIAISLADQIGGIPSMTSSFVVVAGITGAMIGPTVLKFFRITSTIGKGVGMGCASHII
HHHHHEEEHHHHCCCCCHHHCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVSRLMKEGEKEATIGSVTMIVTGILISIFIPYGTKFIF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]