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The map label for this gene is ynbB [H]

Identifier: 30263709

GI number: 30263709

Start: 3508934

End: 3510205

Strand: Reverse

Name: ynbB [H]

Synonym: BA_3835

Alternate gene names: 30263709

Gene position: 3510205-3508934 (Counterclockwise)

Preceding gene: 30263710

Following gene: 30263708

Centisome position: 67.15

GC content: 39.23

Gene sequence:

>1272_bases
ATGTTTGATCGTTTGAAAAATGGAGAAAAGATTGCTCCGATTGTAAAAGAAGTAGAGAGCCAAATTACAGAAGTACATAA
ACGTGCGGATGAAGTAATTGAAAGTAATCAGTTTCGTGTATTAGAAAGTTTTCGTAAACATAAAATTAGTGATTCACATT
TTATTCCGACGACCGGTTACGGTTATGACGATATTGGTCGTGATACGCTAGAAAAAGTGTATGCAGATGTATTTGGAGCG
GAAGCTGGCCTAGTTCGTCCGCAAATCATTTCAGGTACTCACGCTATTTCTACAGCGTTATTTGGTATTTTACGTCCAGG
AGATGAGTTATTGTACATCACTGGCAAGCCGTATGATACGTTAGAAGAAATCGTTGGTGTACGCGGAAAAGGTGTAGGTT
CATTTAAAGAATATAATATTGGTTATAATGCAGTTCCGCTTACTGAAGAGGGGCTTGTTGATTTAGGGGCTGTTGCGGCT
GCCATTCATAGTAATACGAAAATGATCGGTATTCAGCGCTCAAAAGGTTATGCTACTCGTCCGTCTTTTACTATTTCTCA
AATTAAAGAAATGATAGCGTTTGTTAAAGAAATTAAACCGGATGTTGTCGTGTTTGTAGATAACTGTTATGGCGAGTTTA
TTGAAGAACAAGAGCCATGCCATGTTGGTGCAGATTTAATGGCGGGTTCGCTTATTAAAAACCCGGGCGGGGGAATTGTT
AAAACTGGTGGTTATATTGTTGGTAAAGAACAGTATGTTGAAGCGTGTGCCTATCGTTTAACATCTCCAGGAATCGGTGC
GGAAGCAGGAGCATCTTTATATAGTCTGCAAGAAATGTATCAAGGTTTCTTCTTAGCACCGCACGTAGCGGGACAAGCGC
TAAAAGGTGCGATTTTTACAGCTGCATTTTTAGAGAAGTTAGGAATGAATACATCACCAGCATGGAATGCACCAAGAACA
GATTTAATTCAGTCTGTTCAATTTGATGATAAAGATCGTATGATAGCGTTCTGCCAAGCGATTCAATATGCATCTCCGAT
TAATTCCCACTTCACTCCGTATGCGAACTATATGCCAGGTTATGAAGATGATGTCATTATGGCCGCGGGAACGTTTATTC
AAGGTGCGAGTATTGAATTATCAGCTGATGGTCCGATTCGTCCGCCTTATGTTGCTTACGTACAAGGTGGATTAACTTAT
TCGCATGTGAAGATTGCAATTTGTTCTGCAATTGATGCATTAATTGAAAAAGAATTATTAACAATTTCTTAA

Upstream 100 bases:

>100_bases
GAAGATAAATTTGTATATGATTGCGCAGGGTATATTTTTGCTCATTCATCACTTAATGTGCAATTAAAGAGATTTTTAGT
GGAAGAAGGAGAAAATAAAA

Downstream 100 bases:

>100_bases
AGGGAAGCTGTCGATTTCGACAGCTTTTTTCGCGTGAAAGTAAGGATTTATTTCATTAGAAAAAAGAATGAAAAAATTTT
TAAAAAAATCATGTAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAA
AIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRT
DLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKELLTIS

Sequences:

>Translated_423_residues
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAA
AIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRT
DLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKELLTIS
>Mature_423_residues
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAA
AIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRT
DLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKELLTIS

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46041; Mature: 46041

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
GYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
LEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAAAIHSNTKMIGIQRSKGYATR
HHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
CCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT
ECCCEEECHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
AAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPG
HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
YEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDALIEKELL
CCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
TIS
CCC
>Mature Secondary Structure
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
GYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
LEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAAAIHSNTKMIGIQRSKGYATR
HHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
CCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT
ECCCEEECHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
AAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPG
HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
YEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDALIEKELL
CCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
TIS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]