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The map label for this gene is amyB [H]

Identifier: 30263243

GI number: 30263243

Start: 3069652

End: 3070668

Strand: Reverse

Name: amyB [H]

Synonym: BA_3332

Alternate gene names: 30263243

Gene position: 3070668-3069652 (Counterclockwise)

Preceding gene: 30263244

Following gene: 30263242

Centisome position: 58.74

GC content: 37.56

Gene sequence:

>1017_bases
GTGAATCAAGATGGGGATTACAATAAAGCGTTAGAGAATGCAAAGAGACTTGCGGGATATTTAATGAACAAAGAAGGAAT
TAGCGCGGACCATATTTATAGACATCAACAATGGAGCGGGAAAAACTGTCCTGATATTTTAATTTCTCGTGGGAATTGGA
CTGGCTTCGTACAAGGTATTCAGTGGTATGCAAATGTTAACGCACAAATTGATTCGCCTTTACAAGAAAGAAATGAGCTA
TTTGATTCAAATGAATATAATCCAGCTGAACCTAATATGGAGCTTGTAGTAAAAGGGGATGGTATAAACGTACGTAGTGG
TGCAGGACTGGAACATCAAACTGTGCGTAAAGCTTCAAATGGAGACCGTTACAAAGTGTTAGCAGTTAAAAACGGTTGGT
ATAAAGTAGGTAATGATGAGTGGATTTTCTATAACCCAAGTTGGATTAAAATAAACTATAATGTGCCAAATAAAGAAGTA
CAAAAACCAAAAGATGATATTACAGGTGGATGGTTTGAAGGGCATATTCGTAAGTTGAACAGCCTTGGAATTATGCACGG
TGAAGGAAATGGTGTATTTGCGCCTTATCGTAATGTAACGAGAGCTGAGTTTGCGACATTAATTTCAAATGCTCTTAAAC
TACCAGAAGGAAATAAGACATTTGTAGACATTAACAAAGCGCATCCGTCACTTCATAATGGTATAAAGCGTAGTGCAAGT
GCAGGAATTATTAACGGTCGTGGCGGCGGGATTTTTGATCCTAACGCATCTATCACTCGTGAAGAAGCATCGATCATGAT
TGACAAAGCATTACAGTATAAAGGTGTTACAGGTGAATTAGCCGCATTACCATTTACAGATCAACATTTAATTACATACA
AACAGCATGTTCAACGATTATATAGCTTAAAGGTAGTTACTGGTGTTGGAAATAATGAGTTTAATCCTAAAGGGACGACA
ACTCGTGGTGAAGCAGCTGCCTTTTTAGTAAAGATGTTAGATGCAAGTCAAAAATAG

Upstream 100 bases:

>100_bases
TAAACAAATTTATCAGCACTTACCAACAAATGAAAATGGTTGGCATGCAGGAGATGGTGATGGTTCAGGAAATAGAGAAT
CTATCGGTATTGAAATTTCA

Downstream 100 bases:

>100_bases
AAAGAATGATAAAGGAGCTATCCAAAATGAGAATTTGGAACAGCTCCTTTTTATATAAGCCCTTATTAAGCCCCTTACAA
GCCCCTTATAAGCACCTACC

Product: S-layer protein, putative

Products: NA

Alternate protein names: Alpha-amylase/pullulanase; Pullulanase type II; Alpha-amylase; 1,4-alpha-D-glucan glucanohydrolase; Pullulanase; 1,4-alpha-D-glucan glucanohydrolase; Alpha-dextrin endo-1,6-alpha-glucosidase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNQDGDYNKALENAKRLAGYLMNKEGISADHIYRHQQWSGKNCPDILISRGNWTGFVQGIQWYANVNAQIDSPLQERNEL
FDSNEYNPAEPNMELVVKGDGINVRSGAGLEHQTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINYNVPNKEV
QKPKDDITGGWFEGHIRKLNSLGIMHGEGNGVFAPYRNVTRAEFATLISNALKLPEGNKTFVDINKAHPSLHNGIKRSAS
AGIINGRGGGIFDPNASITREEASIMIDKALQYKGVTGELAALPFTDQHLITYKQHVQRLYSLKVVTGVGNNEFNPKGTT
TRGEAAAFLVKMLDASQK

Sequences:

>Translated_338_residues
MNQDGDYNKALENAKRLAGYLMNKEGISADHIYRHQQWSGKNCPDILISRGNWTGFVQGIQWYANVNAQIDSPLQERNEL
FDSNEYNPAEPNMELVVKGDGINVRSGAGLEHQTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINYNVPNKEV
QKPKDDITGGWFEGHIRKLNSLGIMHGEGNGVFAPYRNVTRAEFATLISNALKLPEGNKTFVDINKAHPSLHNGIKRSAS
AGIINGRGGGIFDPNASITREEASIMIDKALQYKGVTGELAALPFTDQHLITYKQHVQRLYSLKVVTGVGNNEFNPKGTT
TRGEAAAFLVKMLDASQK
>Mature_338_residues
MNQDGDYNKALENAKRLAGYLMNKEGISADHIYRHQQWSGKNCPDILISRGNWTGFVQGIQWYANVNAQIDSPLQERNEL
FDSNEYNPAEPNMELVVKGDGINVRSGAGLEHQTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINYNVPNKEV
QKPKDDITGGWFEGHIRKLNSLGIMHGEGNGVFAPYRNVTRAEFATLISNALKLPEGNKTFVDINKAHPSLHNGIKRSAS
AGIINGRGGGIFDPNASITREEASIMIDKALQYKGVTGELAALPFTDQHLITYKQHVQRLYSLKVVTGVGNNEFNPKGTT
TRGEAAAFLVKMLDASQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Note=It C-terminus may serve as an S-layer anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013784
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004185
- InterPro:   IPR006589
- InterPro:   IPR002044
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N; PF00395 SLH [H]

EC number: =3.2.1.1; =3.2.1.41 [H]

Molecular weight: Translated: 37608; Mature: 37608

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQDGDYNKALENAKRLAGYLMNKEGISADHIYRHQQWSGKNCPDILISRGNWTGFVQGI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCHHHEEECCCCEEHHEEE
QWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEHQTVRKASN
EEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHCCC
GDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINYNVPNKEVQKPKDDITGGWFEGHIRKLN
CCEEEEEEEECCEEEECCCCEEEECCEEEEEEECCCCHHHCCCCHHCCCCHHHHHHHHHH
SLGIMHGEGNGVFAPYRNVTRAEFATLISNALKLPEGNKTFVDINKAHPSLHNGIKRSAS
HCEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCC
AGIINGRGGGIFDPNASITREEASIMIDKALQYKGVTGELAALPFTDQHLITYKQHVQRL
CCEEECCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHH
YSLKVVTGVGNNEFNPKGTTTRGEAAAFLVKMLDASQK
HHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQDGDYNKALENAKRLAGYLMNKEGISADHIYRHQQWSGKNCPDILISRGNWTGFVQGI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCHHHEEECCCCEEHHEEE
QWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEHQTVRKASN
EEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHCCC
GDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINYNVPNKEVQKPKDDITGGWFEGHIRKLN
CCEEEEEEEECCEEEECCCCEEEECCEEEEEEECCCCHHHCCCCHHCCCCHHHHHHHHHH
SLGIMHGEGNGVFAPYRNVTRAEFATLISNALKLPEGNKTFVDINKAHPSLHNGIKRSAS
HCEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCC
AGIINGRGGGIFDPNASITREEASIMIDKALQYKGVTGELAALPFTDQHLITYKQHVQRL
CCEEECCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHH
YSLKVVTGVGNNEFNPKGTTTRGEAAAFLVKMLDASQK
HHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195085 [H]