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The map label for this gene is ntdB [H]

Identifier: 30263198

GI number: 30263198

Start: 3017757

End: 3018617

Strand: Reverse

Name: ntdB [H]

Synonym: BA_3281

Alternate gene names: 30263198

Gene position: 3018617-3017757 (Counterclockwise)

Preceding gene: 30263202

Following gene: 30263197

Centisome position: 57.75

GC content: 30.2

Gene sequence:

>861_bases
ATGTCAATAAGTAATGAAGTTTTGAAGTCTTTAAATTTTGAAAGACTACCACAGGTTAAAAACCCGAAATATGTAGTGTT
CTGTGATTTTGATGAAACTTATTATCCTCATAGCATGGATGATTCTAAAAGAAGCAATATGAAATTGTTAGAAAAGTATT
TGTATGAACAAGGAAGTAAAGGGGATTTAGTAATTGGTTGGGTAACGGGAAGTAGTTTAGAATCAATTGTTGAAAAAATG
AAAAAGGGTGGTATACAGTATTTTCCTCATTTTGTGGCGAGTGGATTAGGTACAGAAATAACGTACTTTGATAGTAATGG
GACTACTATAGATGATCAAATTTGGAAAGAGAGAATTATAGAGGGTGGTTTTGATTCTTCAAAAATTGAAAGAATTATTC
ACTTGCTAGAAATGAAATATGAAATTTTTTTAAGACCTCAGACACAATTAGGAAGTTCTAAGTACAAATTTAATTTTTAT
TATGAAGAGCAAAATGAATTTATTGATGCAAAGAATTTAGAAAAGATAGAAGAAATCGGAGAGATATTCCAAGTTGGAGT
TAATATTAACAAATGTAATCCATTAGCTGGTGACCCAGAAAATTGCTATGATGTAGATTTTATTCCACTTGGAACAGGTA
AAGATGAGATAGTGAAATTTATTTTAGACAAGTACGAACTAGATAAATCAAATGCAATTGCTTTTGGCGATAGTGGGAAT
GATTTAAGAATGCTACAAGCTGTAAGACATGGTTATTTAGTAGAAAATGCAACAGAAGAGGCTAAAAAAATACACTCAAT
GTTAGCTCAAGGTGAATACTCGATTGGAATTTTAAATACTCTAAAGCACATTATTAATTAA

Upstream 100 bases:

>100_bases
ATGTTCAATACAGAGCAAGTTCATAAAGAAATATTACATCTACCTTTACATCCAAATATGATGTTAGAAGAGCAAAATTT
CGTTTTGGAGGGATTATTCA

Downstream 100 bases:

>100_bases
AAGGAGATGTTCATATAATGAATATTGGAATTATAGGTGCAGGAAGTATTGCAAGAGCTCATTCTAGAGCATTATCAACT
ATTGATAATTGTAAATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSISNEVLKSLNFERLPQVKNPKYVVFCDFDETYYPHSMDDSKRSNMKLLEKYLYEQGSKGDLVIGWVTGSSLESIVEKM
KKGGIQYFPHFVASGLGTEITYFDSNGTTIDDQIWKERIIEGGFDSSKIERIIHLLEMKYEIFLRPQTQLGSSKYKFNFY
YEEQNEFIDAKNLEKIEEIGEIFQVGVNINKCNPLAGDPENCYDVDFIPLGTGKDEIVKFILDKYELDKSNAIAFGDSGN
DLRMLQAVRHGYLVENATEEAKKIHSMLAQGEYSIGILNTLKHIIN

Sequences:

>Translated_286_residues
MSISNEVLKSLNFERLPQVKNPKYVVFCDFDETYYPHSMDDSKRSNMKLLEKYLYEQGSKGDLVIGWVTGSSLESIVEKM
KKGGIQYFPHFVASGLGTEITYFDSNGTTIDDQIWKERIIEGGFDSSKIERIIHLLEMKYEIFLRPQTQLGSSKYKFNFY
YEEQNEFIDAKNLEKIEEIGEIFQVGVNINKCNPLAGDPENCYDVDFIPLGTGKDEIVKFILDKYELDKSNAIAFGDSGN
DLRMLQAVRHGYLVENATEEAKKIHSMLAQGEYSIGILNTLKHIIN
>Mature_285_residues
SISNEVLKSLNFERLPQVKNPKYVVFCDFDETYYPHSMDDSKRSNMKLLEKYLYEQGSKGDLVIGWVTGSSLESIVEKMK
KGGIQYFPHFVASGLGTEITYFDSNGTTIDDQIWKERIIEGGFDSSKIERIIHLLEMKYEIFLRPQTQLGSSKYKFNFYY
EEQNEFIDAKNLEKIEEIGEIFQVGVNINKCNPLAGDPENCYDVDFIPLGTGKDEIVKFILDKYELDKSNAIAFGDSGND
LRMLQAVRHGYLVENATEEAKKIHSMLAQGEYSIGILNTLKHIIN

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 32757; Mature: 32625

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISNEVLKSLNFERLPQVKNPKYVVFCDFDETYYPHSMDDSKRSNMKLLEKYLYEQGSK
CCCHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GDLVIGWVTGSSLESIVEKMKKGGIQYFPHFVASGLGTEITYFDSNGTTIDDQIWKERII
CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHH
EGGFDSSKIERIIHLLEMKYEIFLRPQTQLGSSKYKFNFYYEEQNEFIDAKNLEKIEEIG
CCCCCHHHHHHHHHHHHHHHHEEECCHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHH
EIFQVGVNINKCNPLAGDPENCYDVDFIPLGTGKDEIVKFILDKYELDKSNAIAFGDSGN
HHHHHCCCCCCCCCCCCCCCCCEECEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
DLRMLQAVRHGYLVENATEEAKKIHSMLAQGEYSIGILNTLKHIIN
HHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
SISNEVLKSLNFERLPQVKNPKYVVFCDFDETYYPHSMDDSKRSNMKLLEKYLYEQGSK
CCHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GDLVIGWVTGSSLESIVEKMKKGGIQYFPHFVASGLGTEITYFDSNGTTIDDQIWKERII
CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHH
EGGFDSSKIERIIHLLEMKYEIFLRPQTQLGSSKYKFNFYYEEQNEFIDAKNLEKIEEIG
CCCCCHHHHHHHHHHHHHHHHEEECCHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHH
EIFQVGVNINKCNPLAGDPENCYDVDFIPLGTGKDEIVKFILDKYELDKSNAIAFGDSGN
HHHHHCCCCCCCCCCCCCCCCCEECEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
DLRMLQAVRHGYLVENATEEAKKIHSMLAQGEYSIGILNTLKHIIN
HHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]