Click here to switch to the map view.

The map label for this gene is slyA [C]

Identifier: 30260915

GI number: 30260915

Start: 789725

End: 790195

Strand: Reverse

Name: slyA [C]

Synonym: BA_0770

Alternate gene names: 30260915

Gene position: 790195-789725 (Counterclockwise)

Preceding gene: 30260926

Following gene: 30260911

Centisome position: 15.12

GC content: 34.82

Gene sequence:

>471_bases
ATGGATCAAACATTTAACGAGTTAGATCTTACATCGCTTTTATCATTATCATTTAGCACATTAATTACTGAGCTACATGA
CAAATTAAGTGAATTAGGATTTGAGGATATTAGACCAGCACATGGTTTTATGTTCAAACGCATCCTTCCTAATGGGGCAA
CTGGTATAGAGCTAGCTGAGTATTTAGGGGTTTCCAAACAAGCTGTAAGTAAAATGGTGGATTCTCTTGAGAATAGTGGC
TACGTTACACGTAAAACACACCCTACTGATAAAAGGGGTAAAATCATTGTTTTAACCGAACGTGGTTTAGCAGTAATGAA
AGCAAAAGAAGAAATAGTAGCTGAAATAGAGCAGCGATGGATTGAAAATATAGGTACAGAACGAATGCAAATGCTAAAAG
AAGATTTAACAACATTCGTTACTAAAGAAAATACAGAGAAATTATCATCAAATATACGACCTGTCTGGTAA

Upstream 100 bases:

>100_bases
CATGTGAAACCTCCATTGATTCTATATTATATAAATCATTATTTATTCTACCAACATAATATAGTCAACTTAATTGACTA
CAAGTGCGGAGGTTATATAT

Downstream 100 bases:

>100_bases
ACAAAAACCCATACAAAAAACGAATCCACTTTGATTCATCTTCTTCAAAATGGATTCGTTTTCTACAGATGTATTAAAAA
TCATTAATTTCTTTACATTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; MarR Family Regulator; MarR Family; Regulatory Protein MarR; LOW QUALITY PROTEIN MarR Family Transcriptional Regulator; Marr Family Transcriptional Regulator

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDQTFNELDLTSLLSLSFSTLITELHDKLSELGFEDIRPAHGFMFKRILPNGATGIELAEYLGVSKQAVSKMVDSLENSG
YVTRKTHPTDKRGKIIVLTERGLAVMKAKEEIVAEIEQRWIENIGTERMQMLKEDLTTFVTKENTEKLSSNIRPVW

Sequences:

>Translated_156_residues
MDQTFNELDLTSLLSLSFSTLITELHDKLSELGFEDIRPAHGFMFKRILPNGATGIELAEYLGVSKQAVSKMVDSLENSG
YVTRKTHPTDKRGKIIVLTERGLAVMKAKEEIVAEIEQRWIENIGTERMQMLKEDLTTFVTKENTEKLSSNIRPVW
>Mature_156_residues
MDQTFNELDLTSLLSLSFSTLITELHDKLSELGFEDIRPAHGFMFKRILPNGATGIELAEYLGVSKQAVSKMVDSLENSG
YVTRKTHPTDKRGKIIVLTERGLAVMKAKEEIVAEIEQRWIENIGTERMQMLKEDLTTFVTKENTEKLSSNIRPVW

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17731; Mature: 17731

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTFNELDLTSLLSLSFSTLITELHDKLSELGFEDIRPAHGFMFKRILPNGATGIELAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCHHHHHH
YLGVSKQAVSKMVDSLENSGYVTRKTHPTDKRGKIIVLTERGLAVMKAKEEIVAEIEQRW
HHCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
IENIGTERMQMLKEDLTTFVTKENTEKLSSNIRPVW
HHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDQTFNELDLTSLLSLSFSTLITELHDKLSELGFEDIRPAHGFMFKRILPNGATGIELAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCHHHHHH
YLGVSKQAVSKMVDSLENSGYVTRKTHPTDKRGKIIVLTERGLAVMKAKEEIVAEIEQRW
HHCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
IENIGTERMQMLKEDLTTFVTKENTEKLSSNIRPVW
HHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA