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The map label for this gene is lytR [H]

Identifier: 30260760

GI number: 30260760

Start: 618631

End: 619632

Strand: Reverse

Name: lytR [H]

Synonym: BA_0605

Alternate gene names: 30260760

Gene position: 619632-618631 (Counterclockwise)

Preceding gene: 30260761

Following gene: 30260759

Centisome position: 11.85

GC content: 34.33

Gene sequence:

>1002_bases
ATGAACAAAGATACTCGAGCCAAAAAAGGACGCTCAAAGAAAAAACGTCTACTTTGGTTCCTTCTTATTCCATTACTGAT
TATAGCACTTGGAGCAGGGGGATACTCCTTCCATATATACAGTAAAGCAAAATCAATTTTAAGTAATGCCTATTCTGAGC
TGGGTCGCGGAGATAAATCCAGCAAACGTGAAAAAGCCGTTAAACCTATGACTGACAACATTTCCATACTTATTATGGGT
GTTGATGAAAGTGATATTAGGGACAAGAATTATGGGAAAGCAACTCGTACAGATGCACTATTACTTGCCACAATTAATAA
AAACGATAAATCTGTTAAACTTGTTAGTATTCCACGTGACTCACGTGTCTACATTAAATCACGTGAGAAATACGATAAAA
TTACACATGCGCACGTATTCGGTGGTGTGGACAGCACGATTGATACCGTAGAGAACTTTTTAGATGTTCCAGTTGACTAC
TATGTAAAATTCAACTTTAAATCATTTATCAAAATTGTTGATTCCCTTGGTGGTATTACTGTCGATGTTCCAGTTGAATT
CACAGAACAAAATAGTAAAGATGAGGCTGATGCAATTCACCTTAAAAAAGGACGTCAACATTTAAATGGAGAAGAAGCAC
TGGCACTAGCTAGAACTCGTCATATCGATAGTGATTATATGCGAGGTCAACGTCAACAACTTGTTTTAGAAGCTATTGCT
GAAAAGGCATTATCTCTTAATTCCATTAATAAAATCGGTGGTCTATTAGACGCTGTTGATAAAGACTTAAAAACAAATTT
AACTTTTGATGATATGATGACAATTGCAAAAAATTCAATGGGTTCAAACTTAAAAATGGACAAATTGCAAGTAGAAGGTA
CTGATAAATATATAGGTGGTATTTATTATTACGTTCCAAATGAAAAAAGCGTCAATAATATATCGACAACACTACAAGAA
CATCTCGGTGTTACGAATAAAAATGAACATAAAAAATTATAA

Upstream 100 bases:

>100_bases
TCGCTTTTATTTAGCGTACAATATTTTTTATGTATTTAAATGCGCTTCTAGATGTATACACTTTGATAGTTTTAAAGGAA
AAAAAATGATGAAATCCGAT

Downstream 100 bases:

>100_bases
TAAAAAGGCTGCTAGAACTTTCTAGACAGCCTTTTTATTATAATTTTCAACATATTTTCCATGCATATTGTGACAAAAAG
AGACAATTATTACAACAGTG

Product: LytR family transcription antiterminator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNISILIMG
VDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDY
YVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIA
EKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNISTTLQE
HLGVTNKNEHKKL

Sequences:

>Translated_333_residues
MNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNISILIMG
VDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDY
YVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIA
EKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNISTTLQE
HLGVTNKNEHKKL
>Mature_333_residues
MNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNISILIMG
VDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDY
YVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIA
EKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNISTTLQE
HLGVTNKNEHKKL

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 37377; Mature: 37377

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCC
SKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRD
HHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
SRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGIT
CEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCEE
VDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIA
EEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
EKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEECE
IYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL
EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNKDTRAKKGRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCC
SKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRD
HHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
SRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGIT
CEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCEE
VDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIA
EEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
EKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEECE
IYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL
EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA