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The map label for this gene is ydiL [H]

Identifier: 30260441

GI number: 30260441

Start: 257393

End: 258100

Strand: Reverse

Name: ydiL [H]

Synonym: BA_0265

Alternate gene names: 30260441

Gene position: 258100-257393 (Counterclockwise)

Preceding gene: 30260448

Following gene: 30260440

Centisome position: 4.94

GC content: 35.31

Gene sequence:

>708_bases
ATGCAGTTATCATCAATTGCTGGATTACCACTTCTCCTGAAAACTGGACTTTATGATAACAGGGGATTTACTAGGGAAGA
GAAATTTCAACTCATAACTGGTCACTGGGCAATCATTAGCTTCTTTATTGCATTATGTATCGTACTTTGGTTACTTAGAA
CAGATATTCGCGACAGACATTTAGATACAAAGCGTTCTACTGTTCCAGCTACGATTGGTTGGATTTTTATCGGGTTCTTC
TTAGCATTTTTCTCGCAAAGTATTGCTGGTATGATTGAAATGTATGTATTAGGTATTAAACCTGGATCTGAAAATACAGC
GAGACTTATGGATATTGCAAGAACGACACCTTGGTTCCTTATCGTCATCTCTATAATAGGACCTATTTTGGAAGAAATCG
TATTTAGAAAAATTTTATTTGGTACACTTTATAAGAAGTTTAACTTCTTTATTGCCGCTATTATTAGTTCCCTTGTATTT
GCGGCCATTCACTTTGATTTTACTCACTTATTGGTATACACTGCTATGGGGCTCGTATTCGCCTTCTTATATGTAAAAAC
AAAGCGTATTATCGTTCCAATCGCAGCGCATGTTGCAATGAATACATTAGTTGCAATTGCTCAAGTTTTAGTGAGTAACG
AACAAATTCAAGAAATGATTAAAGAAGCTGAAAAAATGCAAGGCTTTATCGGAGGATTTTTAGTATGA

Upstream 100 bases:

>100_bases
TTTACATGTTATCCTACCTTATCTCATACACTAGAGTTAGAAAGGATGGTTAAACCATTTGAAAAAACAATATTGGTGGG
TTATCGTTACATACATTTTA

Downstream 100 bases:

>100_bases
GAAACTCACCATTGTTCATGGCTGCATTGTACTTCCTTCTAGGATGTATCTTTACACATCTAGCCATTAGGAATGTAACA
GATACAATCTGGAATATGTG

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MQLSSIAGLPLLLKTGLYDNRGFTREEKFQLITGHWAIISFFIALCIVLWLLRTDIRDRHLDTKRSTVPATIGWIFIGFF
LAFFSQSIAGMIEMYVLGIKPGSENTARLMDIARTTPWFLIVISIIGPILEEIVFRKILFGTLYKKFNFFIAAIISSLVF
AAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLVAIAQVLVSNEQIQEMIKEAEKMQGFIGGFLV

Sequences:

>Translated_235_residues
MQLSSIAGLPLLLKTGLYDNRGFTREEKFQLITGHWAIISFFIALCIVLWLLRTDIRDRHLDTKRSTVPATIGWIFIGFF
LAFFSQSIAGMIEMYVLGIKPGSENTARLMDIARTTPWFLIVISIIGPILEEIVFRKILFGTLYKKFNFFIAAIISSLVF
AAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLVAIAQVLVSNEQIQEMIKEAEKMQGFIGGFLV
>Mature_235_residues
MQLSSIAGLPLLLKTGLYDNRGFTREEKFQLITGHWAIISFFIALCIVLWLLRTDIRDRHLDTKRSTVPATIGWIFIGFF
LAFFSQSIAGMIEMYVLGIKPGSENTARLMDIARTTPWFLIVISIIGPILEEIVFRKILFGTLYKKFNFFIAAIISSLVF
AAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLVAIAQVLVSNEQIQEMIKEAEKMQGFIGGFLV

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U48 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 26574; Mature: 26574

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSSIAGLPLLLKTGLYDNRGFTREEKFQLITGHWAIISFFIALCIVLWLLRTDIRDRH
CCCCHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDTKRSTVPATIGWIFIGFFLAFFSQSIAGMIEMYVLGIKPGSENTARLMDIARTTPWFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHH
IVISIIGPILEEIVFRKILFGTLYKKFNFFIAAIISSLVFAAIHFDFTHLLVYTAMGLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLYVKTKRIIVPIAAHVAMNTLVAIAQVLVSNEQIQEMIKEAEKMQGFIGGFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLSSIAGLPLLLKTGLYDNRGFTREEKFQLITGHWAIISFFIALCIVLWLLRTDIRDRH
CCCCHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDTKRSTVPATIGWIFIGFFLAFFSQSIAGMIEMYVLGIKPGSENTARLMDIARTTPWFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHH
IVISIIGPILEEIVFRKILFGTLYKKFNFFIAAIISSLVFAAIHFDFTHLLVYTAMGLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLYVKTKRIIVPIAAHVAMNTLVAIAQVLVSNEQIQEMIKEAEKMQGFIGGFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]