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The map label for this gene is yjiZ

Identifier: 30065598

GI number: 30065598

Start: 4551811

End: 4553172

Strand: Reverse

Name: yjiZ

Synonym: S4657

Alternate gene names: 30065598

Gene position: 4553172-4551811 (Counterclockwise)

Preceding gene: 30065599

Following gene: 30065595

Centisome position: 99.0

GC content: 51.76

Gene sequence:

>1362_bases
GTGGAAAAAGAAAATATCACCCTCGATCCGCGTTCTTCATTTACTCCATCTTCGTCGGCAGATATTCCCGTGCCACCAGA
TGGATTAGTTCAACGCAGTACCCGAATTAAACGCATTCAAACCACCGCCATGTTGTTATTATTTTTTGCGGCGGTAATCA
ATTATCTCGACCGCAGTTCGCTGTCGGTAGCAAATTTAACGATTCGTGAAGAATTGGGATTAAGTGCCACCGAAATCGGC
GCTTTGCTCTCCGTGTTTTCACTCGCTTACGGCATTGCGCAACTTCCTTGCGGCCCACTATTGGATCGTAAAGGCCCACG
CCTGATGCTGGGACTGGGGATGTTCTTCTGGTCACTGTTCCAGGCCATGTCTGGCATGGTGCACAGCTTTACGCAGTTCG
TGTTGGTGCGTATCGGTATGGGGATTGGTGAAGCGCCGATGAACCCATGCGGTGTAAAAGTCATTAACGACTGGTTCAAC
ATCAAAGAGCGCGGACGCCCGATGGGCTTCTTCAACGCAGCTTCTACCATTGGCGTTGCTGTAAGCCCACCGATTCTGGC
GGCAATGATGCTGGTGATGGGCTGGCGCGGGATGTTTATTACCATTGGTGTACTGGGGATTTTTCTCGCCATCGGCTGGT
ATATGCTCTATCGCAACCGCGAGCACGTAGAACTGACTGCCGTTGAACAAGCTTATCTCAATGCAGGTAGCGTCAATGCC
CGCCGAGATCCGCTCAATTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGCACAATGTGGGGAATGATGCTCGGATTCAG
TGGCATCAACTACACTGCGTGGCTGTATCTGGCCTGGCTTCCTGGTTACCTGCAAACAGCCTATAACCTGGATTTAAAAA
GCACAGGGTTGATGGCGGCTATCCCTTTCCTGTTTGGGGCTGCCGGGATGCTGGTCAACGGTTACGTTACTGACTGGCTG
GTCAAAGGGGGAATGGCTCCGATTAAAAGCCGTAAGATCTGCATTATTACCGGGATGTTCTGTTCTGCCGCCTTTACGCT
GATAGTACCACAAGCGACAACATCCATGATGGCGGTTCTGCTGATTGGCATGGCACTGTTCTGTATTCACTTTGCCGGAA
CATCCTGCTGGGGCTTGATCCACGTCGCAGTTGCTTCTCGCATGACTGCGTCGGTGGGCAGTATCCAGAACTTTGCCAGC
TTCATCTGCGCCTCTTTCGCGCCGATCATTACTGGTTTTATTGTTGATACAACCCACTCATTCCGTCTGGCACTAATCAT
TTGCGGTTGCGTCACCGCAGCGGGAGCACTGGCGTACATCTTCCTGGTTCGCCAGCCGATCAACGACCCGCGTAAAGATT
AA

Upstream 100 bases:

>100_bases
AGCGGTAGTAAAGTCCTAAAACTTTAACCTGCCGTTAATGTCAACCTTGCGTAATGCACAATTACGTAAACAATTAAAAT
TATAAATACAGGAGTCCGGC

Downstream 100 bases:

>100_bases
ACTCCCTATGCCCGATAACATTTTGCTTATCGGGCATTTTTATGGCGATTAAAACGTTTCCCAGTTCTCCCCGCTATCTG
CCACTGCCATTTTACGCGGC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIG
ALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLFQAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFN
IKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA
RRDPLNFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWL
VKGGMAPIKSRKICIITGMFCSAAFTLIVPQATTSMMAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFAS
FICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDPRKD

Sequences:

>Translated_453_residues
MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIG
ALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLFQAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFN
IKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA
RRDPLNFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWL
VKGGMAPIKSRKICIITGMFCSAAFTLIVPQATTSMMAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFAS
FICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDPRKD
>Mature_453_residues
MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIG
ALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLFQAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFN
IKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA
RRDPLNFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWL
VKGGMAPIKSRKICIITGMFCSAAFTLIVPQATTSMMAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFAS
FICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDPRKD

Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI9966811, Length=424, Percent_Identity=21.2264150943396, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI6912666, Length=388, Percent_Identity=20.6185567010309, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI9945322, Length=389, Percent_Identity=21.3367609254499, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI154350196, Length=325, Percent_Identity=23.3846153846154, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI148743791, Length=371, Percent_Identity=21.0242587601078, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI185136021, Length=416, Percent_Identity=24.7596153846154, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI21322234, Length=393, Percent_Identity=20.8651399491094, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI4885441, Length=384, Percent_Identity=20.3125, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI2367379, Length=453, Percent_Identity=98.8962472406181, Blast_Score=914, Evalue=0.0,
Organism=Escherichia coli, GI1789515, Length=433, Percent_Identity=29.7921478060046, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI87082320, Length=435, Percent_Identity=29.6551724137931, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1789152, Length=436, Percent_Identity=27.7522935779816, Blast_Score=168, Evalue=7e-43,
Organism=Escherichia coli, GI2367193, Length=308, Percent_Identity=27.9220779220779, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082310, Length=453, Percent_Identity=22.075055187638, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082071, Length=293, Percent_Identity=22.1843003412969, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI25141316, Length=473, Percent_Identity=24.1014799154334, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI25141318, Length=410, Percent_Identity=23.6585365853659, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI25141341, Length=373, Percent_Identity=23.5924932975871, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI115533556, Length=416, Percent_Identity=22.3557692307692, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI86561091, Length=391, Percent_Identity=23.7851662404092, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115533554, Length=416, Percent_Identity=22.3557692307692, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17554148, Length=333, Percent_Identity=24.9249249249249, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71997452, Length=404, Percent_Identity=21.039603960396, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17566884, Length=293, Percent_Identity=25.2559726962457, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17535049, Length=443, Percent_Identity=20.3160270880361, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI193205400, Length=393, Percent_Identity=22.9007633587786, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554962, Length=404, Percent_Identity=21.7821782178218, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17560030, Length=370, Percent_Identity=22.1621621621622, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24648416, Length=448, Percent_Identity=22.9910714285714, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21356189, Length=448, Percent_Identity=22.9910714285714, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24641682, Length=402, Percent_Identity=22.636815920398, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24654215, Length=364, Percent_Identity=24.7252747252747, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19922400, Length=364, Percent_Identity=24.7252747252747, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639764, Length=429, Percent_Identity=21.4452214452214, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24655271, Length=446, Percent_Identity=23.0941704035874, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573708, Length=467, Percent_Identity=20.9850107066381, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573707, Length=467, Percent_Identity=20.9850107066381, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24583789, Length=305, Percent_Identity=22.6229508196721, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI20130135, Length=446, Percent_Identity=23.0941704035874, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573299, Length=414, Percent_Identity=23.6714975845411, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24584153, Length=393, Percent_Identity=21.882951653944, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45550460, Length=440, Percent_Identity=23.6363636363636, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24658658, Length=454, Percent_Identity=23.1277533039648, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654041, Length=387, Percent_Identity=23.2558139534884, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24655255, Length=405, Percent_Identity=23.4567901234568, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24654037, Length=387, Percent_Identity=23.2558139534884, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17864456, Length=332, Percent_Identity=23.4939759036145, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24654039, Length=332, Percent_Identity=23.4939759036145, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550364, Length=295, Percent_Identity=23.0508474576271, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20130167, Length=311, Percent_Identity=20.2572347266881, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49501; Mature: 49501

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSS
CCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLF
CHHEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
QAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCCE
VSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA
ECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCC
RRDPLNFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAA
CCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIITGMFCSAAFTLIVPQATTSMMAVL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHEECHHHHHHHHHH
LIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FRLALIICGCVTAAGALAYIFLVRQPINDPRKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSS
CCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLF
CHHEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
QAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCCE
VSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA
ECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCC
RRDPLNFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAA
CCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIITGMFCSAAFTLIVPQATTSMMAVL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHEECHHHHHHHHHH
LIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FRLALIICGCVTAAGALAYIFLVRQPINDPRKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]