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The map label for this gene is yjgK

Identifier: 30065461

GI number: 30065461

Start: 4403997

End: 4404449

Strand: Reverse

Name: yjgK

Synonym: S4500

Alternate gene names: 30065461

Gene position: 4404449-4403997 (Counterclockwise)

Preceding gene: 30065462

Following gene: 30065457

Centisome position: 95.76

GC content: 50.11

Gene sequence:

>453_bases
ATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAGCATATCAAAGCACA
CGTTACGGCAGAAACGCCAAAGGGCAAGCATGATATCGAAGGCAATCGTCTGTTTTATCTTATCTCGGAAGATATGACCG
AGCCGTACGAAGCTCGCCGTGCGGAGTACCATGCCCGCTATCTTGACATTCAGATTGTGTTAAAAGGTCAGGAAGGCATG
ACCTTCAGCACGCAACCTGCAGGCGCGCCGGATACCGACTGGTTAGCTGATAAAGACATCGCATTTTTGCCGGAAGGCGT
TGATGAGAAAACAGTTATCCTAAATGAAGGTGATTTTGTTGTGTTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAG
TGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGA

Upstream 100 bases:

>100_bases
TGTGATAAGACAATAATTCACGCGTTAAGGCTGGCGGAATTGATCATCTTTTCGTATAACGATAGAAATGAAACATTGTT
TTAATTAAGGAGTGGAAAAG

Downstream 100 bases:

>100_bases
TGACTTTTCGCCGTAAATAACTCCAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAA
TTTGTAATGCTTAGACGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGM
TFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA

Sequences:

>Translated_150_residues
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGM
TFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>Mature_150_residues
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGM
TFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhcH/yiaL/yjgK family

Homologues:

Organism=Escherichia coli, GI87082398, Length=150, Percent_Identity=100, Blast_Score=312, Evalue=6e-87,
Organism=Escherichia coli, GI1789615, Length=141, Percent_Identity=29.0780141843972, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1790001, Length=152, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJGK_ECOLI (P0AF96)

Other databases:

- EMBL:   U14003
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S56477
- RefSeq:   AP_004748.1
- RefSeq:   NP_418673.4
- ProteinModelPortal:   P0AF96
- SMR:   P0AF96
- DIP:   DIP-48214N
- STRING:   P0AF96
- EnsemblBacteria:   EBESCT00000001876
- EnsemblBacteria:   EBESCT00000018214
- GeneID:   948777
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5756
- KEGG:   eco:b4252
- EchoBASE:   EB2420
- EcoGene:   EG12530
- eggNOG:   COG2731
- GeneTree:   EBGT00050000009310
- HOGENOM:   HBG698441
- OMA:   MEKMIIG
- ProtClustDB:   CLSK880880
- BioCyc:   EcoCyc:G7883-MONOMER
- Genevestigator:   P0AF96
- InterPro:   IPR004375
- Gene3D:   G3DSA:2.60.120.370
- TIGRFAMs:   TIGR00022

Pfam domain/function: PF04074 DUF386

EC number: NA

Molecular weight: Translated: 16866; Mature: 16866

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARR
CEECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHH
AEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFV
HHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCEE
VFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
EECCCCCCCCEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARR
CEECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHH
AEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFV
HHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCEE
VFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
EECCCCCCCCEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 10493123