| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is pabA
Identifier: 30065354
GI number: 30065354
Start: 4312665
End: 4313228
Strand: Direct
Name: pabA
Synonym: S4384
Alternate gene names: 30065354
Gene position: 4312665-4313228 (Clockwise)
Preceding gene: 30065353
Following gene: 30065355
Centisome position: 93.77
GC content: 53.72
Gene sequence:
>564_bases ATGATCCTGCTTATAGATAACTACGATTCTTTTACCTGGAACCTCTACCAGTACTTTTGTGAACTGGGGGCGGATGTGCT GGTTAAGCGCAACGATGCGTTGACGCTGGCGGATATCGACGCCCTTAAACCACAAAAAATTGTCATCTCACCTGGCCCCT GTACGCCAGATGAAGCCGGGATCTCCCTTGACGTTATTCGCCACTATGCCGGGCGCTTGCCGATTCTTGGCGTCTGCCTC GGTCATCAGGCAATGGCGCAGGCATTTGGCGGCAAAGTTGTGCGCGCCGCAAAGGTCATGCACGGCAAAACCTCGCCGAT TACACATAGCGGTGAGGGCGTATTTCGGGGGCTGGCAAATCCACTTACCGTGACACGCTACCATTCGCTGGTGGTGGAAC CTGACTCATTACCAGCGTGCTTTGACGTGACGGCCTGGAGCGAAACCCGCGAGATTATGGGGATTCGCCATCGCCAGTGG GATCTGGAAGGTGTGCAGTTCCATCCAGAAAGTATTCTTAGCGAACAAGGACATCAACTGCTGGCTAATTTCCTGCATCT CTGA
Upstream 100 bases:
>100_bases ATGGGGGATCTCACCGCACTGCAGATGATATTTAGCAAAGTGGTAAGCGAAGCCGGGGAATCTGAGTAAAATAGCGCGGT TCTTTCGTACCGGAGCCGCC
Downstream 100 bases:
>100_bases TTTCCGATTGCCATTCAGTGATTTTTTATGCATATTTTGTGATTATAATTTCACATTTATTTATGCGTAACAGGGTGATC ATGAGATGGCAATTGAACAA
Product: para-aminobenzoate synthase component II
Products: NA
Alternate protein names: ADC synthase [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCL GHQAMAQAFGGKVVRAAKVMHGKTSPITHSGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW DLEGVQFHPESILSEQGHQLLANFLHL
Sequences:
>Translated_187_residues MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCL GHQAMAQAFGGKVVRAAKVMHGKTSPITHSGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW DLEGVQFHPESILSEQGHQLLANFLHL >Mature_187_residues MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCL GHQAMAQAFGGKVVRAAKVMHGKTSPITHSGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW DLEGVQFHPESILSEQGHQLLANFLHL
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=186, Percent_Identity=99.4623655913979, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI1787517, Length=187, Percent_Identity=43.8502673796791, Blast_Score=150, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322638, Length=187, Percent_Identity=51.8716577540107, Blast_Score=222, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6324361, Length=213, Percent_Identity=31.924882629108, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 20702; Mature: 20702
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00442 GATASE_TYPE_I ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAG CEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCC ISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHSGEGVFRGLAN CCHHHHHHHHCCCCEEHHHHCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCC PLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQL CEEEEEEEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHH LANFLHL HHHHHCC >Mature Secondary Structure MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAG CEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCC ISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHSGEGVFRGLAN CCHHHHHHHHCCCCEEHHHHCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCC PLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQL CEEEEEEEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHH LANFLHL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6350604; 2403545; 9278503; 2546924; 8096767 [H]