Click here to switch to the map view.

The map label for this gene is yhfU

Identifier: 30065338

GI number: 30065338

Start: 4295737

End: 4296129

Strand: Direct

Name: yhfU

Synonym: S4366

Alternate gene names: 30065338

Gene position: 4295737-4296129 (Clockwise)

Preceding gene: 30065337

Following gene: 30065339

Centisome position: 93.4

GC content: 46.31

Gene sequence:

>393_bases
GTGAAAATCCCTCTCAATTTTTCCAATAAGGACAGACTCATGAAAAAGATTGGCGTTGCAGGCTTACAGCGTGAGCAGAT
TAAAAAAACCATTGAAGCGACGGCTCCTGGCTGTTTTGAAGTTTTCATTCACAACGACATGGAAGCGGCAATGAAGGTGA
AATCCGGGCAACTAGATTATTACATTGGCGCGTGTAATACCGGTGCGGGCGCGGCATTGTCGATTGCCATCGCGGTGATT
GGCTATAACAAAAGTTGCACCATTGCCAAACCAGGCATTAAAGCGAAAGACGAGCATATCGCCAAAATGATCGCTGAAGG
GAAAGTGGCGTTTGGCCTTTCCGTTGAGCACGTCGAACACGCGATTCCGATGTTGATTAACCATCTGAAATAA

Upstream 100 bases:

>100_bases
AAAGCCAATGGTGGTTATGGCTATGACTATTTATTGACCACCTTTATTCCGCAATTGCGCCAGTCAGGATTCAGTCAGGC
CGATGTGGATGTGATGTTAC

Downstream 100 bases:

>100_bases
AAGGCACGACTATGGATCTGTATATTCAGATTATCGTGGTGGCGTGCCTGACGGGTATGACATCGCTTCTGGCGCATCGC
TCGGCGGCTGTTTTTCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKIPLNFSNKDRLMKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVI
GYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK

Sequences:

>Translated_130_residues
MKIPLNFSNKDRLMKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVI
GYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK
>Mature_130_residues
MKIPLNFSNKDRLMKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVI
GYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082253, Length=117, Percent_Identity=100, Blast_Score=236, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021238
- InterPro:   IPR003500 [H]

Pfam domain/function: PF10941 DUF2620 [H]

EC number: NA

Molecular weight: Translated: 14037; Mature: 14037

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPLNFSNKDRLMKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDY
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCEE
YIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEH
EEEECCCCCCHHEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEECCCHHHHHH
AIPMLINHLK
HHHHHHHHCC
>Mature Secondary Structure
MKIPLNFSNKDRLMKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDY
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCEE
YIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEH
EEEECCCCCCHHEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEECCCHHHHHH
AIPMLINHLK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]