| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is feoB
Identifier: 30065308
GI number: 30065308
Start: 4260681
End: 4263002
Strand: Reverse
Name: feoB
Synonym: S4335
Alternate gene names: 30065308
Gene position: 4263002-4260681 (Counterclockwise)
Preceding gene: 30065309
Following gene: 30065307
Centisome position: 92.69
GC content: 54.69
Gene sequence:
>2322_bases ATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTGGCAAGACAACCTTATTTAACCAGCTCACTGGCGCACG TCAGCGTGTAGGTAACTGGGCTGGCGTTACCGTCGAACGTAAAGAAGGGCAATTCTCCACCACCGATCATCAGGTCACGC TGGTGGACCTGCCCGGCACCTATTCTCTGACCACCATCTCATCGCAGACCTCGCTCGATGAGCAAATCGCCTGTCACTAC ATTTTGAGTGGCGACGCCGACCTGCTGATTAACGTGGTGGATGCGTCTAACCTTGAGCGTAACCTGTACCTGACGCTGCA ACTGCTGGAACTCGGCATTCCCTGCATCGTGGCGCTGAACATGCTCGACATTGCCGAGAAGCAAAATATTCGTATTGAAA TTGATGCTCTATCGGCACGTCTTGGCTGCCCGGTGATCCCGCTGGTTTCAACCCGTGGTCGCGGTATTGAAGCGCTCAAG CTGGCGATTGATCGCTATAAAGCTAACGAGAATGTGGAACTGGTGCATTACGCACAGCCGCTACTCAACGAAGCAGATTC ACTGGCAAAAGTGATGCCTTCCGACATCCCGCTGAAACAACGTCGCTGGCTGGGCCTGCAAATGCTGGAAGGCGATATCT ACAGCCGCGCCTACGCCGGTGAAGCGTCGCAGCATCTGGATGCCACCCTCGCCCGTCTGCGTAATGAAATGGATGATCCG GCGCTGCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACC CAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACC TGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTAACGTCGGCTCCGTGGCGCTATTTGTGCAT GGTATTCAATGGATTGGCTACACGCTCCACTTCCCGGACTGGCTGACTATCTTCCTCGCCCAGGGCCTGGGTGGCGGTAT TAACACCGTGCTGCCACTGGTGCCGCAGATCGGCATGATGTACCTGTTCCTCTCCTTCCTTGAGGACTCCGGCTATATGG CGCGTGCAGCGTTTGTGATGGACCGCCTGATGCAGGCGCTGGGCTTGCCGGGGAAATCCTTTGTGCCGCTGATCGTCGGT TTCGGTTGTAACGTACCGTCGGTAATGGGCGCACGTACGCTTGATGCACCGCGTGAACGTCTGATGACCATCATGATGGC ACCGTTTATGTCCTGCGGCGCGCGTCTGGCTATCTTCGCAGTATTCGCGGCTGCCTTCTTCGGGCAGAACGGTGCCCTGG CGGTTTTCTCGCTGTATATGCTCGGTATCGTGATGGCGGTGCTGACTGGCCTGATGCTCAAGTACACCATCATGCGCGGT GAAGCGACGCCGTTTGTCATGGAGCTGCCGGTCTACCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCG TCTGAAGGGCTTCGTTCTGCGTGCTGGTAAAGTGATTATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGT TGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGCTTCCGTCAGCCGGGTGATAACCCCTGTCTTCAAGCCG ATTGGCGTACATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACGGGCGCAATGGCAAAAGAAGTGGTGGTGGGTAC GCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCGGAATTCAACCTCGGTGAAGAGCTGT TCAGTGCGGTAGATGAAACCTGGCAGAGCCTGAAAGACACCTTCAGCCTTAGCGTACTGATGAACCCCATTGAAGCTAGC AAAGGCAACGGTGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCTGCCGCATACAGCTA CCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGAGCCATCGCCCGTGAATCAAGCCGTGGCTGGATGG GCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCAC CCAACTTACAGCCTGGTGTGCATTCTGGCGGTAATCCTGTTTAACATCGTAGCTATCGGTCTGCTGCGCCGCGCGCGTAG CCGGGTGGATATCGAACTGCTGGCAACCCGCAAGTCGGTAAGCAGTTGCTGCGCAGCCAGCACCACCGGTGATTGCCATT AA
Upstream 100 bases:
>100_bases ATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTG TTAATACGGTGATAACAACA
Downstream 100 bases:
>100_bases TGGCTTCACTTATTCAGGTACGTGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGACCCAGATAAGCCAGACATTGAAC ACTCCGCAGCCAATGATTAA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHY ILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDATLARLRNEMDDP ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFNVGSVALFVH GIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVG FGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKP IGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAVDETWQSLKDTFSLSVLMNPIEAS KGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH PTYSLVCILAVILFNIVAIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH
Sequences:
>Translated_773_residues MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHY ILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDATLARLRNEMDDP ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFNVGSVALFVH GIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVG FGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKP IGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAVDETWQSLKDTFSLSVLMNPIEAS KGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH PTYSLVCILAVILFNIVAIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH >Mature_773_residues MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHY ILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDATLARLRNEMDDP ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFNVGSVALFVH GIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVG FGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKP IGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAVDETWQSLKDTFSLSVLMNPIEAS KGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH PTYSLVCILAVILFNIVAIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH
Specific function: GTP-driven Fe(2+) uptake system [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=773, Percent_Identity=99.2238033635188, Blast_Score=1576, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 84445; Mature: 84445
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGT CCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCC YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALN EEEEEECCCCCCCHHHHEEEEECCCCEEEEEEECCCCCCCCCEEEEEHHHHCCHHHHHHH MLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQP HHHHHCCCCCEEEEEEEHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH LLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDATLARLRNEMDDP HHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCC ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAI CEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGGALQPLFNVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMM CCCCHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHCCCCCCHHHHH LMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVD CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEC NINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EFNPAEFNLGEELFSAVDETWQSLKDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHCH AAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC PTYSLVCILAVILFNIVAIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGT CCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCC YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALN EEEEEECCCCCCCHHHHEEEEECCCCEEEEEEECCCCCCCCCEEEEEHHHHCCHHHHHHH MLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQP HHHHHCCCCCEEEEEEEHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH LLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDATLARLRNEMDDP HHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCC ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAI CEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGGALQPLFNVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMM CCCCHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHCCCCCCHHHHH LMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVD CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEC NINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EFNPAEFNLGEELFSAVDETWQSLKDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHCH AAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC PTYSLVCILAVILFNIVAIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]