Click here to switch to the map view.

The map label for this gene is livM

Identifier: 30065267

GI number: 30065267

Start: 4208015

End: 4209292

Strand: Direct

Name: livM

Synonym: S4289

Alternate gene names: 30065267

Gene position: 4208015-4209292 (Clockwise)

Preceding gene: 30065266

Following gene: 30065268

Centisome position: 91.49

GC content: 56.26

Gene sequence:

>1278_bases
ATGAAACCGATGCATATTGCAATGGCACTGCTCTCTGCCGCGATGTTCTTTGTCCTGGCGGGCGTCTTTATGGGCGTACA
ACTGGAGCTGGATGGCACCAAACTGGTGGTCGACACGGCTTCAGACATCCGTTGGCAGTGGATGTTTATCGGCACGGCGG
TGGTCTTTTTCTTCCAGCTTTTGCGACCGGCTTTCCAGAAAGGGTTGAAAAGCGTTTCCGGGCCGAAGTTTATTCTGCCC
GCGATTGATGGGTCCACGGTGAAGCAAAAGCTGTTCCTCGTGGCGCTGCTGGTGCTTGTGGTGGCGTGGCCGTTTATGGT
GTCACGTGGGACGGTGGATATCGCCACTCTGACCATGATCTACATTATCCTCGGTCTCGGGCTGAATGTGGTTGTTGGTC
TTTCTGGTCTGCTGGTGCTGGGGTACGGCGGTTTTTACGCCATCGGCGCTTACACTTTTGCGCTGCTCAATCACTATTAC
GGTCTGGGGTTCTGGACCTGTTTGCCGATTGCCGGACTGATGGCAGCGGCGGCGGGTTTCCTGCTCGGTTTTCCGGTGCT
GCGTCTGCGCGGTGACTATCTGGCGATCGTTACCCTTGGTTTCGGCGAAATTGTGCGCATATTGCTGCTCAATAACACTG
AAATCACCGGCGGCCCGAACGGAATCAGTCAGATCCCGAAACCGACACTCTTCGGACTCGAGTTCAGCCGTACCGCTCGT
GAAGGCGGCTGGGACACGTTCAGTAATTTCTTTGGCCTGAAATACGATCCGTCCGATCGCGTTATCTTCCTCTACCTGGT
GGCGTTGCTGCTGGTGGTGTTAAGCCTGTTTGTCATTAACCGCCTGCTGCGGATGCCGCTGGGCCGCGCGTGGGAAGCGT
TGCGTGAAGACGAGATCGCCTGTCGTTCGCTGGGCTTAAGCCCGCGCCGTATCAAGCTGACTGCTTTTACCATCAGCGCC
GCATTTGCCGGTTTTGCCGGAACGCTGTTTGCGGCGCGTCAGGGCTTTGTCAGCCCGGAATCCTTCACCTTTGCTGAATC
GGCCTTTGTGCTGGCGATAGTGGTGCTCGGCGGTATGGGCTCGCAATTTGCAGTGATTCTGGCGGCTGTTCTGCTGGTGG
TGTCGCGCGAATTGATGCGTGATTTCAACGAATACAGCATGTTAATGCTCGGTGGTTTGATGGTGCTGATGATGATCTGG
CGTCCGCAGGGTTTGCTGCCCATGACGCGCCCGCAACTGAAGCTGAAAAACGGCGCAGCGAAAGGAGAGCAGGCATGA

Upstream 100 bases:

>100_bases
TGAGTACGGAATATAAAGATGTGGTCTCATTCGCCCTGCTGATTCTGGTGCTGCTGGTGATGCCGACCGGTATTCTGGGT
CGCCCGGAGGTAGAGAAAGT

Downstream 100 bases:

>100_bases
GTCAGCCATTATTATCTGTTAACGGTCTGATGATGCGCTTCGGCGGCCTGCTGGCGGTGAACAACGTCAATCTTGAACTG
TACCCGCAGGAAATCGTCTC

Product: leucine/isoleucine/valine transporter permease subunit

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWMFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILP
AIDGSTVKQKLFLVALLVLVVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR
EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISA
AFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMIW
RPQGLLPMTRPQLKLKNGAAKGEQA

Sequences:

>Translated_425_residues
MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWMFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILP
AIDGSTVKQKLFLVALLVLVVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR
EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISA
AFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMIW
RPQGLLPMTRPQLKLKNGAAKGEQA
>Mature_425_residues
MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWMFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILP
AIDGSTVKQKLFLVALLVLVVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR
EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISA
AFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMIW
RPQGLLPMTRPQLKLKNGAAKGEQA

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=425, Percent_Identity=99.0588235294118, Blast_Score=833, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 46330; Mature: 46330

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWMFIGTAVVFFFQL
CCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHH
LRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLVVAWPFMVSRGTVDIATLTMI
HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR
HHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEECCCHHHHHC
EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIA
CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG
HHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
SQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC
KGEQA
CCCCC
>Mature Secondary Structure
MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWMFIGTAVVFFFQL
CCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHH
LRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLVVAWPFMVSRGTVDIATLTMI
HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR
HHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEECCCHHHHHC
EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIA
CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG
HHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
SQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC
KGEQA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]