Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

Click here to switch to the map view.

The map label for this gene is yhhK

Identifier: 30065264

GI number: 30065264

Start: 4205128

End: 4205511

Strand: Reverse

Name: yhhK

Synonym: S4286

Alternate gene names: 30065264

Gene position: 4205511-4205128 (Counterclockwise)

Preceding gene: 30065274

Following gene: 30065258

Centisome position: 91.44

GC content: 55.99

Gene sequence:

>384_bases
ATGAAGCTGACCATCATTCGATTAGAAAACTTTAGCGACCAGGACCGGATTGACCTGCAAAAGATCTGGCCGGAGTATTC
CCCTTCCTCTTTACAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGTCTGCTTGCGGCCGTGCGGG
TAACCTTAAGCGGCACCGAGGGAGCACTGGATTCTCTACGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATAT
CTGCTGGAAGAGGTTTTGCGTAACAATCCTGGCGTTTCATGCTGGTGGATGGCGGATGCAGGCGTGGAAGATCGCGGTGT
GATGACGGCGTTTATGCAGGCACTGGGATTTACGGCACAGCAGGGCGGCTGGGAGAAGCGTTAA

Upstream 100 bases:

>100_bases
AAAAAATTAATCACCTGCCAAAAGAAATAAAAAAGAGAAAGCCTCCGATTAAATTATTTCGCTACACTGGTTCCACTTTT
GTGATTTACACGGGTTACCC

Downstream 100 bases:

>100_bases
TCGTCAAGTTGATTTCAAAAGTGATGACCAACGAGAAATTGCCTGATGCGCTACGCTTATCAGGCCTATAATGTGTGCTG
CAATTTACTGATTTCTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQY
LLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQQGGWEKR

Sequences:

>Translated_127_residues
MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQY
LLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQQGGWEKR
>Mature_127_residues
MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQY
LLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQQGGWEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1789869, Length=126, Percent_Identity=99.2063492063492, Blast_Score=258, Evalue=9e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14545; Mature: 14545

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTE
CEEEEEEECCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEHHCHHEEEHHHEEECCCC
GALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQ
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
QGGWEKR
CCCCCCC
>Mature Secondary Structure
MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTE
CEEEEEEECCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEHHCHHEEEHHHEEECCCC
GALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQ
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
QGGWEKR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]