Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yhiI

Identifier: 30065238

GI number: 30065238

Start: 4178757

End: 4179824

Strand: Direct

Name: yhiI

Synonym: S4260

Alternate gene names: 30065238

Gene position: 4178757-4179824 (Clockwise)

Preceding gene: 30065237

Following gene: 30065239

Centisome position: 90.86

GC content: 59.18

Gene sequence:

>1068_bases
ATGGATAAGAGTAAGCGCCATCTGGCGTGGTGGGTTGTCGGGGCACTGGCGGTGGCTGCCGTCGTGGCGTGGTGGCTGTT
GCGCCCGGCGGGTGTGCCGGAAGGCTTTGCTGTCAGCAATGGGCGCATTGAAGCGACGGAAGTGGATATCGCCAGCAAAA
TTGCCGGGCGTATCGACACCATTCTGGTGAAAGAAGGCCAGTTTGTTCGCGAAGGCGAAGTGCTGGCGAAGATGGATACT
CGCGTGTTGCAGGAACAGCGACTGGAAGCCATCGCGCAAATCAAAGAGGCACAAAGCGCCGTTGCCGCCGCGCAGGCTTT
GCTGGAGCAACGACAAAGTGAAACTCGTGCCGCACAGTCGCTGGTCAATCAACGCCAGGCCGAACTGGACTCTGTTGCCA
AACGTCATACGCGTTCCCGCTCGCTCGCCCAACGAGGGGCTATTTCTGCGCAACAGCTGGATGACGACCGCGCCGCCGCT
GAGAGCGCCCGAGCTGCGCTGGAATCAGCGAAAGCCCAGGTTTCGGCTTCTAAAGCGGCTATAGAAGCAGCACGCACCAA
TATCATTCAGGCGCAAACTCGGGTCGAAGCAGCGCAAGCCACTGAACGGCGCATTGCCGCAGATATCGATGACAGTGAAC
TGAAAGCCCCGCGTGACGGACGCGTGCAGTATCGGGTTGCCGAGCCAGGGGAAGTGCTGGCGGCAGGCGGTCGGGTGCTG
AATATGGTCGATCTCAGCGACGTCTATATGACCTTCTTCCTGCCAACCGAACAGGCGGGCACGCTGAAACTGGGCGGTGA
AGCCCGGCTGATCCTCGATGCCGCGCCAGATCTGCGTATTCCTGCAACCATCAGTTTTGTCGCCAGTGTCGCCCAGTTCA
CGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTC
CAGCAGCATCTGGAATATGTCAAAACCGGTTTACCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGA
CGACCTCGTGGTGAGGTTGCCGCAATGA

Upstream 100 bases:

>100_bases
GTCGTTTCCTTCTTATCCCGGATGGAAGAATCCGCTGAACGTCGTTCGGCGGCAGTTGTAACACGCGTCGTTTGCTTACA
GGGATTATGGCGGGTCGATT

Downstream 100 bases:

>100_bases
CGCATCTGGAACTGGTTCCCGTCCCGCCTGTCGCGCAACTGGCGGGCGTGAGCCAGCATTATGGAAAAACCGTTGCGCTG
AACAATATCACTCTCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDT
RVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAA
ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL
NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL
QQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ

Sequences:

>Translated_355_residues
MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDT
RVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAA
ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL
NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL
QQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
>Mature_355_residues
MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDT
RVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAA
ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL
NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL
QQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789900, Length=355, Percent_Identity=99.1549295774648, Blast_Score=696, Evalue=0.0,
Organism=Escherichia coli, GI1787013, Length=277, Percent_Identity=30.3249097472924, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003997
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 38773; Mature: 38773

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEEEEHHHHHHHHHHHHHHE
ILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQS
EEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECCCCHHHHCCCCEE
NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVET
EEEEHHHEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
SDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCC
>Mature Secondary Structure
MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEEEEHHHHHHHHHHHHHHE
ILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQS
EEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECCCCHHHHCCCCEE
NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVET
EEEEHHHEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
SDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]