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The map label for this gene is 30065234

Identifier: 30065234

GI number: 30065234

Start: 4171175

End: 4171936

Strand: Reverse

Name: 30065234

Synonym: S4836

Alternate gene names: NA

Gene position: 4171936-4171175 (Counterclockwise)

Preceding gene: 30065242

Following gene: 161486386

Centisome position: 90.71

GC content: 37.27

Gene sequence:

>762_bases
GTGCTATCGAAAATAACTCAGGAGCTACTTAAGATGAATAATGTCTTACTCATGAGACCCGATGACTCAGAATTTATGAT
ACCTGATGACTGGTCAGGGCTAAACGCAAAAGGCATTACATACGAACAAGATAATAGAGTGACAGAGTCTTTTCTGCCTT
TTAAATCTTTTTATTGTTCACCGGTGTGCACGACAGTTGAACTCATCTCACAAAATAATTGTTTTGCTATGGGTATCCGC
TACCTTCTGGAAAAGAAAAGAGACTTAAGGCTAAATCACTTTAAAGCCTTCTCTCATAAATGCGAGACAAAACCTGACGT
GTTAATTATGACCGGGTGCACCGTCGCTGATACTTATAGTATATTCTCACGCATTGTTGAAGAAAATATAATGAAAACGA
TGACACCTATCGTCATCATTACTGGGCATCACTCAGAAGATCTTTGTTCTCTGGCATCGAAACTGGGAGGAGTTAAAATA
ATATCACCGACAGAAAAGATTGCAAAAATAGAAAACGCTATCAATGATGCTTTTAACAGCAAGCCTAAAAAAATAAGATT
TTTAACAGATATACTCTCTCCTCAACAAATTGAGACCATGAAAATGGTTGCGCAGGGTAGATCCGTTAATGAGATTTCAG
CCGCAATGAATATTAGCATCAAGACCGTGTATGCACATAAAGTTCGTGCTATCAATAAGCTGGGAATTAAGAAAAAAGTT
TATGAAGCGCTTTTTTATAAAGCGCTAATTCAGTTCAACTGA

Upstream 100 bases:

>100_bases
CAATATAAAGTATCGCAAGGCGAAAAGTGATGCAAGAATACTCCTAAGTAAATGAAAGCGCACCACATGAAATTATCAAC
ACATGTAATTTCATCATTAG

Downstream 100 bases:

>100_bases
TGTAAAAATCACCCTCGCTTAATAAATAATATATTCTATGTCTTTTTTTATAAGTTAAAAAAGGCGGGATATCAAATCCC
GCCATGAAATTAACTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLSKITQELLKMNNVLLMRPDDSEFMIPDDWSGLNAKGITYEQDNRVTESFLPFKSFYCSPVCTTVELISQNNCFAMGIR
YLLEKKRDLRLNHFKAFSHKCETKPDVLIMTGCTVADTYSIFSRIVEENIMKTMTPIVIITGHHSEDLCSLASKLGGVKI
ISPTEKIAKIENAINDAFNSKPKKIRFLTDILSPQQIETMKMVAQGRSVNEISAAMNISIKTVYAHKVRAINKLGIKKKV
YEALFYKALIQFN

Sequences:

>Translated_253_residues
MLSKITQELLKMNNVLLMRPDDSEFMIPDDWSGLNAKGITYEQDNRVTESFLPFKSFYCSPVCTTVELISQNNCFAMGIR
YLLEKKRDLRLNHFKAFSHKCETKPDVLIMTGCTVADTYSIFSRIVEENIMKTMTPIVIITGHHSEDLCSLASKLGGVKI
ISPTEKIAKIENAINDAFNSKPKKIRFLTDILSPQQIETMKMVAQGRSVNEISAAMNISIKTVYAHKVRAINKLGIKKKV
YEALFYKALIQFN
>Mature_253_residues
MLSKITQELLKMNNVLLMRPDDSEFMIPDDWSGLNAKGITYEQDNRVTESFLPFKSFYCSPVCTTVELISQNNCFAMGIR
YLLEKKRDLRLNHFKAFSHKCETKPDVLIMTGCTVADTYSIFSRIVEENIMKTMTPIVIITGHHSEDLCSLASKLGGVKI
ISPTEKIAKIENAINDAFNSKPKKIRFLTDILSPQQIETMKMVAQGRSVNEISAAMNISIKTVYAHKVRAINKLGIKKKV
YEALFYKALIQFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28714; Mature: 28714

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKITQELLKMNNVLLMRPDDSEFMIPDDWSGLNAKGITYEQDNRVTESFLPFKSFYCS
CHHHHHHHHHHHCCEEEECCCCCCEECCCCCCCCCCCCCEECCCCCHHHHHCCHHHHCCC
PVCTTVELISQNNCFAMGIRYLLEKKRDLRLNHFKAFSHKCETKPDVLIMTGCTVADTYS
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
IFSRIVEENIMKTMTPIVIITGHHSEDLCSLASKLGGVKIISPTEKIAKIENAINDAFNS
HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCC
KPKKIRFLTDILSPQQIETMKMVAQGRSVNEISAAMNISIKTVYAHKVRAINKLGIKKKV
CCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHCHHHHH
YEALFYKALIQFN
HHHHHHHHHHHCC
>Mature Secondary Structure
MLSKITQELLKMNNVLLMRPDDSEFMIPDDWSGLNAKGITYEQDNRVTESFLPFKSFYCS
CHHHHHHHHHHHCCEEEECCCCCCEECCCCCCCCCCCCCEECCCCCHHHHHCCHHHHCCC
PVCTTVELISQNNCFAMGIRYLLEKKRDLRLNHFKAFSHKCETKPDVLIMTGCTVADTYS
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
IFSRIVEENIMKTMTPIVIITGHHSEDLCSLASKLGGVKIISPTEKIAKIENAINDAFNS
HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCC
KPKKIRFLTDILSPQQIETMKMVAQGRSVNEISAAMNISIKTVYAHKVRAINKLGIKKKV
CCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHCHHHHH
YEALFYKALIQFN
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA