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The map label for this gene is yidS

Identifier: 30065000

GI number: 30065000

Start: 3891214

End: 3892314

Strand: Direct

Name: yidS

Synonym: S3997

Alternate gene names: 30065000

Gene position: 3891214-3892314 (Clockwise)

Preceding gene: 161486397

Following gene: 30065011

Centisome position: 84.6

GC content: 51.59

Gene sequence:

>1101_bases
ATGGAACATTTCGACGTGGCGATTATTGGCCTCGGCCCGGCAGGGTCGGCGTTGGCACGAAAGTTAGCCGGCAAAATGCA
GGTGATCGCGCTGGATAAAAAGCACCAGTGCGGTACTGAAGGTTTCAGCAAACCTTGCGGCGGTCTGCTGGCACCGGACG
CGCAGCGATCTTTTATTCGCGATGGACTGACGCTTCCTGTCGATGTGATCGCCAATCCACAGATTTTCAGCGTCAAAACT
GTCGACGTCGCCGCATCGCTCACGCGTAACTACCAGCGAAGCTATATCAATATTAATCGCCATGCTTTCGACTTGTGGAT
GAAATCGCTGATCCCCGCCAGCGTTGAGGTTTATCACGATAGCCTGTGCCGAAAAATCTGGCGTGAGGATGATAAATGGC
ATGTCATTTTTCGTGCAGACGGCTGGGAGCAACATATTACCGCCCGCTATCTGGTCGGTGCCGATGGCGCAAACTCGATG
GTGCGGCGACATCTCTACCCGGATCATCAAATCCGTAAATATGTCGCTATCCAGCAGTGGTTCGCAGAGAAACATCCGGT
GCCGTTCTACTCCTGCATCTTTGATAATGCGATAACTGACTGTTACTCATGGAGTATCAGCAAAGATGGTTATTTTATCT
TTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG
TTTGGCAAAGCGGTGAAAAGTGAGAAATGCACGGTGTTGTTTCCCTCACGCTGGCAGGATTTTGTCTGTGGTAAGGACAA
CGCCTTTCTGATTGGTGAAGCGGCGGGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCGCAG
AGATTCTGCGTGCGGTGTTCCTGAAACAGCCGGAGAAGAGCAACGCCGCTTACTGGCGCGCCACACACAAACTGCGTTTA
AAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGC
GCATATTCCACAGTTGAAAGATTATCCAACGCGCTTCACATCACCCACCAGCAGGATGTAA

Upstream 100 bases:

>100_bases
GGCGCGGTCCTGATACAAAACGGTTCCCGCCATCATACTTCACAAGGACTTCACTTTCAGACAATAGTCTTTTGCCATCG
TGATGAATGTGAGTGAAAAG

Downstream 100 bases:

>100_bases
GAGAGCGCGCCAATCAACGCGACGGCGGAGATATAAACCAGTGCAGGCGCGAAACCGTAACCCTGCGCCAGGTACCCCAC
CACCAGCGGAACGGTGATGC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKT
VDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRAVFLKQPEKSNAAYWRATHKLRL
KLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKDYPTRFTSPTSRM

Sequences:

>Translated_366_residues
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKT
VDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRAVFLKQPEKSNAAYWRATHKLRL
KLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKDYPTRFTSPTSRM
>Mature_366_residues
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKT
VDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRAVFLKQPEKSNAAYWRATHKLRL
KLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKDYPTRFTSPTSRM

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbrA family [H]

Homologues:

Organism=Escherichia coli, GI87082319, Length=354, Percent_Identity=97.1751412429379, Blast_Score=722, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 41450; Mature: 41450

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIR
CCCEEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHD
CCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCHHHHHHHH
SLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQW
HHHHHHHCCCCCEEEEEEECCCHHHCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
FAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHH
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRAVF
HHHHHCCCCEEEECCCCCCHHCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHH
LKQPEKSNAAYWRATHKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKDYPTRFT
HCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
SPTSRM
CCCCCC
>Mature Secondary Structure
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIR
CCCEEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHD
CCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCHHHHHHHH
SLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQW
HHHHHHHCCCCCEEEEEEECCCHHHCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
FAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHH
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRAVF
HHHHHCCCCEEEECCCCCCHHCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHH
LKQPEKSNAAYWRATHKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKDYPTRFT
HCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
SPTSRM
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA