| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30064897
Identifier: 30064897
GI number: 30064897
Start: 3767386
End: 3768423
Strand: Direct
Name: 30064897
Synonym: S3871
Alternate gene names: NA
Gene position: 3767386-3768423 (Clockwise)
Preceding gene: 30064890
Following gene: 30064900
Centisome position: 81.91
GC content: 50.48
Gene sequence:
>1038_bases GTGGTGTACCTGCGCCCTTATAAAGAAACAAATCTTTCTCTACCTGACGTGAATTACAAGAGTTTGCGTCGGTTACCCAA TTTATTAATAGACCCGACAACACTAGACGAATGGGATAAAGAACCGCCTCTGACTGATTTGACAACCGACTACCTCTATG AGGGCGCACAGGCCTGGTATCCTCATTATTCATGGCATAGCGATGGTCGCAATATCCTCTACGCGGGTGAAGTTGTGCAA AACCCTCCCGGCACACCTCCCGTCGATGTCGCCTCGTTCAAGGCATGGGGTGATTTTGCCGCAGATAAACACAGTCTCTA TTTTGAAGGCAAGCGCACCGATGACAATGGTGGTGGAAATAGCTTGGATATCAAAACGCTGCATCAGGTGGAATTCCGGC CTCCCTGGGATCCTGACTTACTGGGGCTGATATTACGTGACGCTAATTTCTTGTATATCAATGGGCATCGCCTCGCTGAC CCCGAGAGTTTCCGTGTGCTGGCGCAGAAGTCCTGGGATCAGCGAGGAAAGTTTTCCACCACGTTTAACCCCTGCATTGC CGTACCATTTGGCCCCTGGGATACCCTGGCTCGTACACGGACCAAAATCCTGCTCAACGGCGAACAGCTTGATGCCGACC CGGACACCTTTTCCGTCGTGCGCTGGATGCCCGGCTCACTCTTGACCTGGCGTGATAAAAACGGGCTGCAGCGTAAAGTC CTCGACAAGGAAAATCTGGCGTGGGATGAAGATTTAACAAAGCACTGTCTGGATTTTTCTCTGCTGGAAAAGAAAGTGTT CTGGCGTAAAGGACCTGCTTGTAAACAGGAAGAATTACCCGGACTCGATCCGGAGCAGTTTCAACCCATCAGTGATGCTG TCGCCCAGCATCAGGACTCGCTTTATACCATCATCGAAACAGAGTCTGGTAACCGTAAGCTGGAGATCGTGAAACTTGAT GATCCCAATCTTATTATCAACAAACGTTTCAACGCCGGGAAACGCCACGGCTATTTACTTACGCGTGCCGAAGGGTAG
Upstream 100 bases:
>100_bases TGTGGTTTGTTTGTTGTCTTGTTCATTGTTTTTATCGTCGGCATGGGGATGTCGGCTTTCCGCACCTGAACATAATATTT ACCAGAAACAGGGAAAAGGC
Downstream 100 bases:
>100_bases CCATACCATTCCGGTTTACACGTGTTTGAATCTGACGGACCGCTGATCTTACTGGATAACCGTTCTCCGGATGAACGCGA AGCCCATCTTAATGACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MVYLRPYKETNLSLPDVNYKSLRRLPNLLIDPTTLDEWDKEPPLTDLTTDYLYEGAQAWYPHYSWHSDGRNILYAGEVVQ NPPGTPPVDVASFKAWGDFAADKHSLYFEGKRTDDNGGGNSLDIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLAD PESFRVLAQKSWDQRGKFSTTFNPCIAVPFGPWDTLARTRTKILLNGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQRKV LDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQHQDSLYTIIETESGNRKLEIVKLD DPNLIINKRFNAGKRHGYLLTRAEG
Sequences:
>Translated_345_residues MVYLRPYKETNLSLPDVNYKSLRRLPNLLIDPTTLDEWDKEPPLTDLTTDYLYEGAQAWYPHYSWHSDGRNILYAGEVVQ NPPGTPPVDVASFKAWGDFAADKHSLYFEGKRTDDNGGGNSLDIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLAD PESFRVLAQKSWDQRGKFSTTFNPCIAVPFGPWDTLARTRTKILLNGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQRKV LDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQHQDSLYTIIETESGNRKLEIVKLD DPNLIINKRFNAGKRHGYLLTRAEG >Mature_345_residues MVYLRPYKETNLSLPDVNYKSLRRLPNLLIDPTTLDEWDKEPPLTDLTTDYLYEGAQAWYPHYSWHSDGRNILYAGEVVQ NPPGTPPVDVASFKAWGDFAADKHSLYFEGKRTDDNGGGNSLDIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLAD PESFRVLAQKSWDQRGKFSTTFNPCIAVPFGPWDTLARTRTKILLNGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQRKV LDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQHQDSLYTIIETESGNRKLEIVKLD DPNLIINKRFNAGKRHGYLLTRAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39584; Mature: 39584
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYLRPYKETNLSLPDVNYKSLRRLPNLLIDPTTLDEWDKEPPLTDLTTDYLYEGAQAWY CEEECCCCCCCCCCCCCCHHHHHHCHHHEECCCCCCCCCCCCCCCCCCHHHHHCCHHHCC PHYSWHSDGRNILYAGEVVQNPPGTPPVDVASFKAWGDFAADKHSLYFEGKRTDDNGGGN CCCCCCCCCCEEEEECCEECCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC SLDIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLADPESFRVLAQKSWDQRGKFST EEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC TFNPCIAVPFGPWDTLARTRTKILLNGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQRKV CCCCEEEECCCCHHHHHHCCEEEEECCCCCCCCCCCEEHEEECCCCEEEEECCCCCHHHH LDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQHQDS CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHCCCHHHHHHHCCCC LYTIIETESGNRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEG EEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEECCC >Mature Secondary Structure MVYLRPYKETNLSLPDVNYKSLRRLPNLLIDPTTLDEWDKEPPLTDLTTDYLYEGAQAWY CEEECCCCCCCCCCCCCCHHHHHHCHHHEECCCCCCCCCCCCCCCCCCHHHHHCCHHHCC PHYSWHSDGRNILYAGEVVQNPPGTPPVDVASFKAWGDFAADKHSLYFEGKRTDDNGGGN CCCCCCCCCCEEEEECCEECCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC SLDIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLADPESFRVLAQKSWDQRGKFST EEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC TFNPCIAVPFGPWDTLARTRTKILLNGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQRKV CCCCEEEECCCCHHHHHHCCEEEEECCCCCCCCCCCEEHEEECCCCEEEEECCCCCHHHH LDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQHQDS CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHCCCHHHHHHHCCCC LYTIIETESGNRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEG EEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA