| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yigG
Identifier: 30064885
GI number: 30064885
Start: 3756940
End: 3757356
Strand: Direct
Name: yigG
Synonym: S3859
Alternate gene names: 30064885
Gene position: 3756940-3757356 (Clockwise)
Preceding gene: 30064884
Following gene: 30064886
Centisome position: 81.68
GC content: 32.85
Gene sequence:
>417_bases ATGCTGACAGGAGACTCACACAAGGATGTAAAATTTATGTTACGTATGTTTATCCCAACATCTAACGGTAAGATTTCCAG ACACCGATATATATTTTTATTTATTTTAATAAATTTCATTTTTGCCTTTCTTATTATCTTTTTTAACGATGGGGAAGCAG GTTTTCTTGTTATAGTCTCTACCATCGCACTCCATTATCTCGTCATCAACATGAATTGCCAACGACTCCGTGATAGTGGT TTCATATATATAAAAATTTATGTTTTTGGTACATTAGCAGTATATATCATCTCTATCATCACAATGATAGCCGAAGATTT TGCCTGTTCAGGCAATGGTTCGATGATTTTTTTGATTTGTTATTTTTCCACTTTCAGTATGCTAATGCTTGCACCTACTG ATTCATCAAAACAATAG
Upstream 100 bases:
>100_bases GTGATGGACGCGATTTATACGCAGCGTAGAACGTCCAAATAAAAAATAAATATATTCTGAAAAAATATGCCGACTCTTGT ATGAGAGTGGGCATATTGCC
Downstream 100 bases:
>100_bases TTATGGAGTATTTATGAGTAAGGAATATATGAACGATGATTCATTAAGTGAAAAATGGAAATACCGATTTAATTTTTATG ATCAACATGGCTTTCCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MLTGDSHKDVKFMLRMFIPTSNGKISRHRYIFLFILINFIFAFLIIFFNDGEAGFLVIVSTIALHYLVINMNCQRLRDSG FIYIKIYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ
Sequences:
>Translated_138_residues MLTGDSHKDVKFMLRMFIPTSNGKISRHRYIFLFILINFIFAFLIIFFNDGEAGFLVIVSTIALHYLVINMNCQRLRDSG FIYIKIYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ >Mature_138_residues MLTGDSHKDVKFMLRMFIPTSNGKISRHRYIFLFILINFIFAFLIIFFNDGEAGFLVIVSTIALHYLVINMNCQRLRDSG FIYIKIYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082335, Length=126, Percent_Identity=96.031746031746, Blast_Score=212, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020332 - ProDom: PD084423 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15777; Mature: 15777
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGDSHKDVKFMLRMFIPTSNGKISRHRYIFLFILINFIFAFLIIFFNDGEAGFLVIVS CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH TIALHYLVINMNCQRLRDSGFIYIKIYVFGTLAVYIISIITMIAEDFACSGNGSMIFLIC HHHHHHHHCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE YFSTFSMLMLAPTDSSKQ HHHHHHEEEECCCCCCCC >Mature Secondary Structure MLTGDSHKDVKFMLRMFIPTSNGKISRHRYIFLFILINFIFAFLIIFFNDGEAGFLVIVS CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH TIALHYLVINMNCQRLRDSGFIYIKIYVFGTLAVYIISIITMIAEDFACSGNGSMIFLIC HHHHHHHHCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE YFSTFSMLMLAPTDSSKQ HHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]