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The map label for this gene is yihS

Identifier: 30064831

GI number: 30064831

Start: 3688818

End: 3690059

Strand: Direct

Name: yihS

Synonym: S3794

Alternate gene names: 30064831

Gene position: 3688818-3690059 (Clockwise)

Preceding gene: 30064830

Following gene: 30064832

Centisome position: 80.2

GC content: 53.22

Gene sequence:

>1242_bases
ATGAAATGGTTTAACACCCTAAGCCACAACCGTTGGCTGGAACAGGAAACCGACCGCATCTTTGATTTTGGTAAAAATTC
CGTAGTGCCGACTGGTTTTGGCTGGTTAGGCAATAAAGGGCAAATCAAAGAAGAGATGGGCACCCATCTGTGGATCACAG
CTCGTATGTTGCACGTTTATTCCGTTGCTGCGGCGATGGGTCGACCTGGCGCTTACGCGTTGGTTGATCACGGTATTAAA
GCCATGAACGGCGCACTGCGTGATAAAAAATATGGCGGCTGGTATGCCTGCGTGAATGACGAGGGCGTGGTGGATGCCTC
CAAACAGGGCTATCAACACTTCTTTGCTCTGCTGGGTGCCGCCAGCGCCGTCACAACGGGTCACCCGGAAGCGCGCAAGC
TGCTCGATTACACCATTGAGATTATCGAGAAATATTTCTGGAGCGAAGAAGAGCAGATGTGCCTGGAGTCCTGGGACGAA
GCCTTCAGCAAAACCGAAGAGTACCGCGGCGGCAATGCCAATATGCACGCGGTGGAAGCTTTCTTGATTGTTTATGACGT
CACTCACGACAAAAAATGGCTGGATCGCGCGATTCGCGTGGCTTCCGTGATTATCCACGACGTCGCCAGAAATAATCATT
ATCGCGTTAACGAACACTTCGATACCCAGTGGAATCCGCTGCCGGATTACAACAAAGATAACCCGGCGCATCGCTTCCGC
GCGTTCGGAGGTACACCAGGCCACTGGATCGAATGGGGCCGTTTAATGCTGCACATCCATGCTGCCCTGGAAGCCCGTTG
CGAACAACCACCAGCATGGCTGCTAGAAGATGCCAAAGGTCTGTTTAACGCCACCGTGCGCGATGCCTGGGCACCCGATG
GAGCGGACGGGATTGTTTATACCGTTGACTGGGAAGGAAAACCGGTGGTCCGCGAACGTGTACGTTGGCCTATCGTCGAA
GCAATGGGTACGGCCTACGCGCTCTACACCGTCACTGGCGATCGCCAGTATGAAACCTGGTATCAAACATGGTGGGAGTA
CTGCATTAAGTACCTGATGGACTATGAAAATGGTTCCTGGTGGCAGGAGCTGGATGCGGACAATAAGGTCATCACCAAAG
TCTGGGACGGCAAACAGGATATTTATCACCTGCTGCATTGCCTGGTGATCCCGCGTATCCCGTTAGCGCCCGGCATGGCT
CCAGCGGTTGCAGCGGGTCTGCTGGATATTAATGCGAAATAA

Upstream 100 bases:

>100_bases
GAGCTGATGCTCCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGTCGACGAAATGATGGCTAAACGCCG
CTAAGATGAGGATAAAAGGA

Downstream 100 bases:

>100_bases
CTGATCTGAAAATAGGGTGCGGGTTTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTCCGGTGCAGTT
TTTGGGTTTGACATCAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYALVDHGIK
AMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVE
AMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVITKVWDGKQDIYHLLHCLVIPRIPLAPGMA
PAVAAGLLDINAK

Sequences:

>Translated_413_residues
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYALVDHGIK
AMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVE
AMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVITKVWDGKQDIYHLLHCLVIPRIPLAPGMA
PAVAAGLLDINAK
>Mature_413_residues
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYALVDHGIK
AMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVE
AMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVITKVWDGKQDIYHLLHCLVIPRIPLAPGMA
PAVAAGLLDINAK

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=413, Percent_Identity=99.5157384987893, Blast_Score=857, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 47429; Mature: 47429

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS01295 ISPD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCEEEHHHHHHHHH
SVAAAMGRPGAYALVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
HHHHHHCCCCCHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEE
FLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVY
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
TVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSW
EEECCCCHHHHHHHCCHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCH
WQELDADNKVITKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK
HHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCEEEHHHHHHHHH
SVAAAMGRPGAYALVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
HHHHHHCCCCCHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEE
FLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVY
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
TVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSW
EEECCCCHHHHHHHCCHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCH
WQELDADNKVITKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK
HHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]