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The map label for this gene is frvR

Identifier: 30064809

GI number: 30064809

Start: 3669507

End: 3670157

Strand: Direct

Name: frvR

Synonym: S3774

Alternate gene names: 30064809

Gene position: 3669507-3670157 (Clockwise)

Preceding gene: 30064808

Following gene: 30064810

Centisome position: 79.78

GC content: 52.84

Gene sequence:

>651_bases
ATGCTAAACGAACGCCAGTTAAAGATTGTCGATCTGCTGGAGCAACAGCCGCGCACGCCTGGTGAGCTGGCGCAACAGAC
TGGCGTTTCAGGCAGGACCATCCTGCGTGATATTGACTATCTCAACTTTACCCTTAACGGCAAAGCCCGCATTTTCGCCA
GTGGCAGTGCGGGCTATCAGCTGGAAATCTTCGAGCGCCGCAGCTTTTTTCAGTTGCTGCAAAAGCACGATAACGACGAT
CGGCTGCTGGCGCTGTTATTACTGAATACTTTCACTCCCCGTGCGCAACTCGCCTCGGCGCTTAATTTGCCAGAAACGTG
GGTAGCAGAGCGTCTGCCCCAGTTAAAACAGCGTTATGAACGCACTTGTTGCCTGGCCAGCCGCCCTGGTTTGGGCCATT
TCATTGATGAGACAGAAGAGAAACTCGTTATCTTGCTGGCGAACTTGCTGCGCAAAGATCCGTTTTTAATTCCGCTGGCG
GGCATAACACGAGACAACCTTCAGCATTTATCCACGGCCTGCGACAACCAACACCGCTGGCCGCTCATACAGGGTGATTA
TCTCTCCAGCCTGATTCTGGCGATTTACGCCCTGCGTAATCAACTGACCGATGAGTGGCCGCAATATCCGGTAATGCTGC
CAACTTACTGA

Upstream 100 bases:

>100_bases
AAGCCGATTACGATGCTCTGCTCACGTTGATACGGGGTTTTCTGACGACCTTAACCGCGGAGAAAGTCAACGCGTTTAGC
CAGTTCCGTCAGGTGGATTA

Downstream 100 bases:

>100_bases
TTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGG
CGTGGTGCGTAACGGCAAAA

Product: putative frv operon regulatory protein

Products: NA

Alternate protein names: Putative phosphotransferase EIIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDD
RLLALLLLNTFTPRAQLASALNLPETWVAERLPQLKQRYERTCCLASRPGLGHFIDETEEKLVILLANLLRKDPFLIPLA
GITRDNLQHLSTACDNQHRWPLIQGDYLSSLILAIYALRNQLTDEWPQYPVMLPTY

Sequences:

>Translated_216_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDD
RLLALLLLNTFTPRAQLASALNLPETWVAERLPQLKQRYERTCCLASRPGLGHFIDETEEKLVILLANLLRKDPFLIPLA
GITRDNLQHLSTACDNQHRWPLIQGDYLSSLILAIYALRNQLTDEWPQYPVMLPTY
>Mature_216_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDD
RLLALLLLNTFTPRAQLASALNLPETWVAERLPQLKQRYERTCCLASRPGLGHFIDETEEKLVILLANLLRKDPFLIPLA
GITRDNLQHLSTACDNQHRWPLIQGDYLSSLILAIYALRNQLTDEWPQYPVMLPTY

Specific function: Could be involved in the regulation of the transcription of the FRV operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIA type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790331, Length=210, Percent_Identity=98.5714285714286, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF00359 PTS_EIIA_2 [H]

EC number: NA

Molecular weight: Translated: 24843; Mature: 24843

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCEE
LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPQLKQRYE
EEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RTCCLASRPGLGHFIDETEEKLVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC
PLIQGDYLSSLILAIYALRNQLTDEWPQYPVMLPTY
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCEE
LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPQLKQRYE
EEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RTCCLASRPGLGHFIDETEEKLVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC
PLIQGDYLSSLILAIYALRNQLTDEWPQYPVMLPTY
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 8019415 [H]